Gene Caul_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1924 
Symbol 
ID5899379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2064809 
End bp2065522 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content67% 
IMG OID641562414 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001683551 
Protein GI167645888 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.62919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTGA GTGGAAAAAC CGTCGTCCTC ACGGGCGCCT CGGCGGGGAT CGGCGCGGCG 
ACCGCGCTGG AACTGAGCCG GGTTGGGTGC AACCTGGTGC TGACGAGCCG CCGGATGGAA
AAGCTCGAGG CGCTCGCCTC GTCCTTGTCG GGCGCCAGCG CCCTGCTAGC CGCCGACATC
GCCGAACCCG GCGTTCCAGA GCAGCTTCTG GCGCTCGCCA AGGATCGGTT CGGACGCGCC
GACGTCGTGA TCAACAACGC CGGGGTGATG GCGGTCGGAA CGATGGACAC CATCGATCTG
GACGCCGTCA GCTACATGAT CCGCGTGAAC TTCGAGGCGG TGGTGCGCAG CTCCTACGTC
TTCGCCCGGG AATTCCGCGG CCAGTCCTCA GGTGCGATCA TCAATGTGTC GAGCATCAGC
GCCTATCTGA CCTCGCGCGC GGGCGGGGTC TACGGCGGGC TGAAGCACGC GCTCGAAGCC
TTCACCCAGT CGCTGCGCAT CGAACTGGCC GGCACGGGCG TGAAGGTCGG CACGATCGCG
CCAGGCTCGA CCTCAAGCGA GATGTTCGAC AAGATGATGG CGGCGGCCAA GGTCGAAAAC
CCGGTCGCGC TCGATCCCGA GGATGTCGCC CGCGCGATCC GCTTCATGCT GGAACAGCCG
GATCGCGCCA ACATCGCCCG GCTGGCGCTC TATCCCCAAG GCGAGGCCCA CTAG
 
Protein sequence
MELSGKTVVL TGASAGIGAA TALELSRVGC NLVLTSRRME KLEALASSLS GASALLAADI 
AEPGVPEQLL ALAKDRFGRA DVVINNAGVM AVGTMDTIDL DAVSYMIRVN FEAVVRSSYV
FAREFRGQSS GAIINVSSIS AYLTSRAGGV YGGLKHALEA FTQSLRIELA GTGVKVGTIA
PGSTSSEMFD KMMAAAKVEN PVALDPEDVA RAIRFMLEQP DRANIARLAL YPQGEAH