Gene Caul_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1896 
Symbol 
ID5899351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2034885 
End bp2035775 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content67% 
IMG OID641562386 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_001683523 
Protein GI167645860 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCAAGA TTGCAGTGGT GGGGGCCGGC CTGATGGGCG TGGGGATCGC GCACGCGTTC 
GCCTCCTCGG GCCATGAGGT GCGCCTGATT GATCTCTCGT CCGAACAACT GGCCAAGGCG
GAGAAGACGA TCGCGGGGAT TCTCGCCGAC GGGGTTCGCC TGGGCAAGGT CGACGAAACG
GCCGCCGCGG CCGCGCTGGC GGGGCTAACG ACCTCGCAAA GCGTCACCGA GGGGGCGGCC
GGGGCCGATC TGCTGGTCGA GACCGTCTCG GAAAACCTGG CGATCAAGAT CGATGTGGTT
CGCAAGGCCG AGCCCGTGAT GGCCGCGACC GGCCTGATCG CGACCAACAC CTCCGCGCTC
AGCGTGACCG AGATCGCCGC CGCCTGTCAG GACCCGACGC GGGTCATTGG CATGCACTTC
TTCAACCCGG TCCAGAAGAT GAAGCTGGTC GAACTGGTGC GCGGCCTGGC CACCACCGAC
GAGGCGGTGG CGCTCTGCCG CGACTATGTC GCCCAACTCG GCAAGACAGC GATCGTGGTC
AACGAGACGC CCGGCCTGAC CACCAGCCGC ATGTCGGCCA TGGCGGGCAA CGAGGCGATG
TGGATGCTGC AGGAAGGCGC CGCGACCGCC GAGGATATCG ACACCGCCCT GAGGATGGGT
TTCAACCACC CGATGGGGCC GCTGGAACTG GGTGACCTGA CGGGCTGGGA CACGCGGCTG
TCGGTCCTGC ACTATCTGCA CAGCACGTTG GGCGACAAGT TCAGGCCGTG CCCGCTGATC
ATCAAGATGG TCAAGGCGGG GCGCTACGGC CGTAAGGTCG GCTGGGGCGT CTACAAGTAC
GAGAACGGCG CGAAGGTGCC TGGCTCTGGC ATGCGAGGGA GCCAGCTGTG A
 
Protein sequence
MAKIAVVGAG LMGVGIAHAF ASSGHEVRLI DLSSEQLAKA EKTIAGILAD GVRLGKVDET 
AAAAALAGLT TSQSVTEGAA GADLLVETVS ENLAIKIDVV RKAEPVMAAT GLIATNTSAL
SVTEIAAACQ DPTRVIGMHF FNPVQKMKLV ELVRGLATTD EAVALCRDYV AQLGKTAIVV
NETPGLTTSR MSAMAGNEAM WMLQEGAATA EDIDTALRMG FNHPMGPLEL GDLTGWDTRL
SVLHYLHSTL GDKFRPCPLI IKMVKAGRYG RKVGWGVYKY ENGAKVPGSG MRGSQL