Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_1874 |
Symbol | |
ID | 5899329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 2010478 |
End bp | 2011641 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641562364 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001683501 |
Protein GI | 167645838 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.33835 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCATTC CCTTCGCGCC CCAGTCGATG GAGTTCGGCC TGGGCGAAAC CGTCGACATG ATCCGCGATA CGACCGCGCG CTGGGCCGCC GACCGTCTGG CGCCGCGCGC CGCCGAGATC GATGCGACCA ACACCTTCGC TCGCGACCTG TGGCCGGAGA TGGGTGAGCT GGGCCTGCAC GGCATCACGG TCGAGGAAGA GTTCGGCGGC CTGGGTTTGG GCTATCTGGA ACATGTCGTG GCGATGGAGG AGGTGTCCCG CGCCTCGGCC TCGATCGGCC TCAGCTACGG CGCCCACTCC AATCTGTGCG TCAACCAGAT CCGCCGCTGG GGCACGCCCG AACAGAAGCG GAAATACCTG CCCGGGCTGA TTTCAGGCGA GCATCTGGGG TCGCTGGCCA TGTCGGAGGC CGGATCGGGC TCGGACGTCA TGTCGATGCG GACGCGCGCC GAGAAGAAGG GCGACCGCTA CATCCTGAAC GGCACGAAGT TCTGGATCAC GAACTCGCCC ACCGCCGACA CCCTGGTCGT CTACGCGCGG ACGGGGGAGG GCAATGGCGG CGTCAGCACC TTCTTGATCG AGAAGGGGAT GAGGGGCTTC AGCGTCAGCA AGAAGCTCGA CAAGTTCGGC ATGCGCGGAT CAGACACGGC CGAGCTGGTG TTCGAGGACT GCGAGGTCCC GGCGGAAAAC GTCATGGGCC CGGTCGGCGG CGGCGCGGGG ATATTGATGA GCGGCCTGGA CTACGAGCGC ACGGTCCTGT CCGGCGGGCC GCTCGGTATC ATGCAGGCCT GTCTGGACGT GGTGCTGCCC TATGTTCGCG AGCGCAAGCA GTTCGGCAAG GCGATCGGCT CCTTCCAGCT CATGCAGGCC AAGGTCGCCG ACATGTACGT CGCTTTGAAT TCTGCCCGGG CCTACGTCTA TGCGGTGGCG CGGGCCTGTG ACGCGGGCAA GACCACGCGG TTCGACGCGG CCGGCGCGAT CCTGCTGGCT TCGGAAAACG CCGTGAGAGT CAGCCTGGAG GCCGTGCAAG CCCTCGGGGG CGCTGGCTAT ACCAAGGAGT GGCCGGTCGA ACGGTTCGTC CGTGACGCCA AGCTCTATGA TATCGGGGCC GGCACCAACG AGATCCGCCG CTTCCTGATC GGCCGTGAGT TGCTGGGCTC GTGA
|
Protein sequence | MSIPFAPQSM EFGLGETVDM IRDTTARWAA DRLAPRAAEI DATNTFARDL WPEMGELGLH GITVEEEFGG LGLGYLEHVV AMEEVSRASA SIGLSYGAHS NLCVNQIRRW GTPEQKRKYL PGLISGEHLG SLAMSEAGSG SDVMSMRTRA EKKGDRYILN GTKFWITNSP TADTLVVYAR TGEGNGGVST FLIEKGMRGF SVSKKLDKFG MRGSDTAELV FEDCEVPAEN VMGPVGGGAG ILMSGLDYER TVLSGGPLGI MQACLDVVLP YVRERKQFGK AIGSFQLMQA KVADMYVALN SARAYVYAVA RACDAGKTTR FDAAGAILLA SENAVRVSLE AVQALGGAGY TKEWPVERFV RDAKLYDIGA GTNEIRRFLI GRELLGS
|
| |