Gene Caul_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1860 
Symbol 
ID5899315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1994482 
End bp1995480 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content73% 
IMG OID641562350 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_001683487 
Protein GI167645824 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.3163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCTG ACATCCCGAC CCAGCCCGTC GGCCTCGACC CGCGCCAGAT CCTGGCCGCC 
AGCCTTTCAC GCCCTCTTTC CGCCGTCGAA CAGGCAGTGC TCGACGCCTG GGCCGAGGGT
TCAGCCCAGG CGCACGAGGA GATCGCCGAG ACGCGCGAGG CCTGGCTGGC CATCGGCCTG
GCCGCCGAGG ATCCGGCTGT GCGCGCCCTG CGCCGCTCGG TGCGGCTGGA GGCGGGCCTG
GACCGTCCCC CGGCGGGTCG CGCCCATGGT CCCGACCGCC GCTGGCTGGT CGGCGGATTG
ACCCTGGCCG CCGCCGGTGT CGTGGCTGGC GCGGTGCTCG TCGATCGTCC ACGGACGGAG
ACCTATGTCG CCCCGCCCCA CGCCGTGGCC CGACTGATCC TGGCCGACGG CAGCCACGTC
ACCCTCAGTC CCGGCGGTCG CCTGACCGCC CGGCTTTCCC GACATGCCCG GACCCTGGCC
CTGATCGACG GCGACGCCTT CTTCGACGTC AGCCACGATG CGCGACGTCC CTTCACCGTG
GCGGTTTCAG ACCGGACCCT GACGGTGCTC GGCACCCGAT TCAACGTCGC CGGCGGACGG
CGTCTGACCG TGTCGCTGGT GCAGGGCGCG CTGCGGGTGA GCCAGACCGA CGCGCCCGAC
GTCCTGTTGC AACCCGGCGA ACGCTACCTC TCGGCCGAGC GCGGCGGTCG CGCCGAAGCC
GGCGACGTGG CGGGCGACGC CGCCTGGACC AGCGGTCGCC TGGTCTTTGC GGACGTCGGC
CTGGTCGAGG TCGCCGAACG GCTCTCGCGC GCGGCCGGCC GGAAGGTGAT TCTCGCCGAT
CCGACCCTGG CCGACCTGCG TCTGTCGGGC TCGGTGCGCG TCGAGCGGCT GGACGACGTT
CGCGCCGCTC TCGAAGTCGC GCTGCCGGTG AAGACCCACA CGACGCCCGA CGGGAGCCTG
GTCATCATCC CGGCCAAGGA CTCGTCCCTA CACGGATGA
 
Protein sequence
MTPDIPTQPV GLDPRQILAA SLSRPLSAVE QAVLDAWAEG SAQAHEEIAE TREAWLAIGL 
AAEDPAVRAL RRSVRLEAGL DRPPAGRAHG PDRRWLVGGL TLAAAGVVAG AVLVDRPRTE
TYVAPPHAVA RLILADGSHV TLSPGGRLTA RLSRHARTLA LIDGDAFFDV SHDARRPFTV
AVSDRTLTVL GTRFNVAGGR RLTVSLVQGA LRVSQTDAPD VLLQPGERYL SAERGGRAEA
GDVAGDAAWT SGRLVFADVG LVEVAERLSR AAGRKVILAD PTLADLRLSG SVRVERLDDV
RAALEVALPV KTHTTPDGSL VIIPAKDSSL HG