Gene Caul_1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1544 
Symbol 
ID5898999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1635757 
End bp1636491 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content69% 
IMG OID641562032 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001683172 
Protein GI167645509 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.846723 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGG GAAGACTTTC CGGCAAGACC GCCCTGGTCA CCGCCGCCGC CCAGGGCATT 
GGCAAGGCCA GCGCCGAGCT GTTCGCGCGC GAGGGCGCGC GGGTGATCGC CACCGACATC
AACGCGGCGC TGCTGGCGGA GATGGCCGGT TGCGAAACAC GCCGTCTGGA CGTGCTGGAC
CCCCAGGCCA TTCTCGACCT CGCCGCCGAG TTGGGTCCGA TCGACGTGCT GTTCAACTGC
GCCGGCTTCG TGCATTCCGG CACCATCCTC GACTGCGACG AGGCGGCCTG GGCGTTCTCC
AACGAGATCA ACGTCAACGC CATGTACCGG ATGATCCGGG CCTTCCTCCC CGCCATGCTC
GGCGCGGGCG GCGGGTCGAT CGTCAACATG TCGTCCGTGG CGAGCTCGAT CAAGGGCGTG
CCCGGCCGCT TCGCCTATGG CGCCACCAAG GCCGCGGTGA TCGGCCTGAC CAAGGCGGTG
GCGGCCGACT TCGTCGGCCA GGGCGTGCGA TGCAACGCCA TCTGCCCCGG CACCGTCGAG
ACGCCATCGC TGAACCAGCG CCTGGCCGAC ACCGGCGACT ACGAGGCCGC TCGCCAGGCC
TTCACGGCCC GCCAGCCGAT GGGACGCCTG GGCAAGCCCG AGGAACTAGC CCAACTGGCC
CTCTACCTGG CCAGCGACGA GTCGGCCTTC ACCACCGGCC AGATCCACAT CATCGACGGG
GGCTGGATCA ATTGA
 
Protein sequence
MTMGRLSGKT ALVTAAAQGI GKASAELFAR EGARVIATDI NAALLAEMAG CETRRLDVLD 
PQAILDLAAE LGPIDVLFNC AGFVHSGTIL DCDEAAWAFS NEINVNAMYR MIRAFLPAML
GAGGGSIVNM SSVASSIKGV PGRFAYGATK AAVIGLTKAV AADFVGQGVR CNAICPGTVE
TPSLNQRLAD TGDYEAARQA FTARQPMGRL GKPEELAQLA LYLASDESAF TTGQIHIIDG
GWIN