| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_1377 |
|---|
| Symbol | |
|---|
| ID | 5898832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 1459610 |
|---|
| End bp | 1461298 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641561864 |
|---|
| Product | type I phosphodiesterase/nucleotide pyrophosphatase |
|---|
| Protein accession | YP_001683005 |
|---|
| Protein GI | 167645342 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGCGG CCATGCGTAG CTTCCTCAAA ACGGCCGCCC GTTCGGCGCT GGCCGCCGTC
GCCCTGTTCG CCGCCCCCGC GTTCGCCGCG CCGCTGGTCA AGCCGGCGCC CAAGCTGGTG
GTGGTCATCT CGATCGACCA GTTCAGCGCC AACCTGTTCG AGCAGTACCG GGCCGACTTC
CATGGCGGCC TCGGCCGGTT GGCGCGGGAG GGCGTGGTCT ATCCCAGCGG CTACCAGTCG
CACGGCATGA CCGAGACCTG CCCCGGCCAC TCCACCCTGC TGACCGGCAA GTATCCGAAC
AAGACCGGCA TCGTCGCCAA CGACTGGTAC GACAAGCAGA CCGGCAAGAA GACCTACTGC
CTGGACGACC CGTCGGTGAC GCTGGCCAAC GACCCGTCCG GCGGCGGTCG CCTGGCCAGC
CCCAAGCTGC TGATGGCCGA AACCTATGGC GACTGGCTGA AGGCCGTCTC GCCCAAGAGC
CGCGTCTACG CCGTGTCGGG CAAGGATCGC GGGGCGATCA ACATGGCCGG CCACAAGGCC
GACGGCGTAT TCTGGCTGGA GACACGGTTT GGCATGACCA CCTGGGTCGA GCCCGGCCAG
GACGCCAAGG CCCGGCTGGC GCCGGTGGCG GCGTTCAACG CCAGGCTGGT GGCCGACCAG
AAGAAAAAGC CCTTTGTCTG GACCTATGCG AACCAGCGCT GCAAGGCGCT CGAGGGCGAC
TATGTCACCG GCGGTCGCGC CTGGCGCGCG GCCCTGCCGC CGCCCGCGCC CAAGGATGAG
GCCGCCGCCG CCAACGACCT GTCGGTCAGC CCCTATACCG ACCGGGTGAC CCTGGAGGCC
GCCCAGGCCC TGCGCGACGC GTTCAAGCTG GGCGACGGCG AGGCGACCGA CGTCCTGACC
ATCAGCCTGT CGGCCACCGA CTTCATCGGC CACCGCTACG GCGCGCGCGG ACCGGAGATG
TGCGACCAGG TCCTGCGCCT GGACGACCGG CTGGGTGTGT TCCTGGGCAG CCTGGACAAG
GTCAAGGGCC AGGTGCTGGT CGTCCTGACC GCCGACCACG GCGGTTCCGA TTTCCCCGAG
CGCCTGGCCG AGCAGGGCTA CGACGCCGGT CGCGTGCCCT CGATCCTGTG GATGAAGGCG
CTGAACGCTC AGGTCCGCGA GCAACTGAAG CTCGACCACG ATCCGCTGGT CCAGGCCGGC
GGCATCGAGT CGCTGTACGC GGTCGGGGCC GACGGCAAGA CGCCGAACGC GGTCGATCGC
GCCCGGGTCG TCGCCGCGAC CCTGGCGATC CTGGCCAAGC GCCCGGAGGT CTACGAGGCC
TACGACACCA ACACCCTGTT CACCGCCGCG CCGCCGCCCA AGGGCACGCC GCCCGACGAG
ATCAGCGTCG CCGAACGTAT GCGCCGCAGC GCCTATCCGG GCCGGGTGGG CGATGTCCTG
GTGGCCTTCC AGCCCTACCA GACCCTCGCG GCGGCGGGCA CGACCTATGT GGCCAGCCAC
GGCAGTCCCT GGGATTACGA CCGCCGCGTG CCGATCGTGT TCTGGTGGAA GGGCGGCGGC
GCCCGCGAGC GCGTGCTGCC GATCGAGACG GTCGACATCG CCCCGACCAT CGCGGCCGTG
ACGGGCGTGC CGGTTCCGAC CGACGTCGAC GGTCGATGCC TGCCGCTGGG GACTGGGCCG
GGCTGTTAG
|
|---|
| Protein sequence | MLAAMRSFLK TAARSALAAV ALFAAPAFAA PLVKPAPKLV VVISIDQFSA NLFEQYRADF
HGGLGRLARE GVVYPSGYQS HGMTETCPGH STLLTGKYPN KTGIVANDWY DKQTGKKTYC
LDDPSVTLAN DPSGGGRLAS PKLLMAETYG DWLKAVSPKS RVYAVSGKDR GAINMAGHKA
DGVFWLETRF GMTTWVEPGQ DAKARLAPVA AFNARLVADQ KKKPFVWTYA NQRCKALEGD
YVTGGRAWRA ALPPPAPKDE AAAANDLSVS PYTDRVTLEA AQALRDAFKL GDGEATDVLT
ISLSATDFIG HRYGARGPEM CDQVLRLDDR LGVFLGSLDK VKGQVLVVLT ADHGGSDFPE
RLAEQGYDAG RVPSILWMKA LNAQVREQLK LDHDPLVQAG GIESLYAVGA DGKTPNAVDR
ARVVAATLAI LAKRPEVYEA YDTNTLFTAA PPPKGTPPDE ISVAERMRRS AYPGRVGDVL
VAFQPYQTLA AAGTTYVASH GSPWDYDRRV PIVFWWKGGG ARERVLPIET VDIAPTIAAV
TGVPVPTDVD GRCLPLGTGP GC
|
|---|
| |