Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_1320 |
Symbol | |
ID | 5898775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 1398729 |
End bp | 1400516 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641561805 |
Product | signal peptide peptidase SppA, 67K type |
Protein accession | YP_001682948 |
Protein GI | 167645285 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAGT TTCTCATGAC CGTGGCCGGC GTCTTCGTCG GCTTGGTGTT GTTCCTCGTC GGCGTCCCCT TCCTTCTGAT CGTCATGGCG GCCAGCGCCA CGCGTCCAGC CCCGGTTCCC GCCCACACGG TGCTGCAACT GGACCTGCGC GGCGGCCTGT CGGACCAGGA GTCCCAGAAC CCGTTCGCGG CGTTCAGCGG CGGCGGCGGC CAGTCGGTGA TGTCGATCGT CGAGACGCTG CGCCGCGCCG AGACCGACGA AAAGGTCAAG GCGGTGCTGG TGCGGCTGCC GGAGGGCGGC ATGGCCCCGG CCTCGGCCGA CGAACTGCGC CTGGCCTTCA AGCACTTCCG CGCGGTCGGC AAGAAGCCGA TCTTCGCCCA CAGCCAGGGG CTCTACCCCT CGGGTCTGGT GACCTCGACC TACATGCTCG GCGCGGCCGC CAGCGAGTTC TGGATGCAAC CCGACAGCTC GCTGCAGGCG GTTGGCGCGG CCAGCGAGGA GATGTTCTTC AAGCGCTTCT TCGACAAGTA CGGCGTCAAG GCCGAGTACG AGCAGCGCTA CGAGTACAAG AACGCGGTCA ATCCCTACCT CTATAGCGAC TACACGCCGG CCCACCGGGA ATCGACCCTG TCGTGGATGG GCTCGGTCTA CACCTCGGCC CTGACGACGG CCGCCCAGGA CCGCAAGGTC GACCCGGCGG CGTTGGTCAA GACCATCGAG GCGGGTCCCT ACAGCGCCGA GGAAGCCAAG GCCAAGGGCC TGATCGACCG CGTCGGCCAG GTCAAGGAGG TCCAGGACGC CATGCTGTCG CGGGCGGGCA AGGGCGCCAA GCTGATCGAC TTCGACGACT ACGTCTCCCG CGCCAAGCGC GCGCCGATCA AGACCGGCCC GACCATCGCG GTCGTCTCGG CCGAGGGCGC GATCATGACC GGCAGCGGCT CGGGCGGCTC GCCGTTCGGC GGCGACAGCA CGATCTATTC CGACCAGGTG TCCAAGGCCC TGTACGACGC GATCGACGAC AAGGACGTCA AGGCGATCGT CTTCCGCGTC TCCTCGCCCG GTGGCTCCGA CACCGCGTCC GAACAGATCC TGGCCGCCGT GAAGGCCGCC AGGAAGGCCG GCAAGCCGGT CGTGGTCTCC ATGGGCACCT ACGCGGCCTC GGGCGGCTAC TGGATCTCGT CGGGCGCCTC GGCGATCGTC GCCGAGCCCA CCACCCTGAC CGGCTCGATC GGCGTCTTCG GCGGCAAGTT CGCCTTGGGC GAGGCCCTGG CGCGGTTTGG CGTCGACACC CGCCAGGTCC ATGTCGGCGG CGACTATGCC GGCGCCTTCG GCACGGGCGA GGGCTTCACG CCCGACCAGC GGGCCAAGTT CTCGGCCTGG ATGGACCGCA TCTATGCCGG CTTCGTGGGC CGCGTCGCCG AGGGCCGCCA CCTGCCGCCC GAACGGGTGC GCGAGATCGC CAAGGGCCGG GTCTGGACCG GCGTCCAGGC CAAGCAACTG GGCCTGGTCG ATGAGCTGGG CGGCTTCTAC GAGGCGGTCG AGAAGGCCAA GAGCCTGGCG GGCCTCAAGG GCGAGGTGAA GCTCAAGAAG ATCGGCGCGT CCAACTCGCC GTTCGACGCC CTGGAGAAGG TGCTGGGGGT CAGCTCGGCC TCCATGCGCA CCCTGGCCGC CTCGGCCTGG CTGCTGGGCG ACCCGCGCTC GCAATCGATC ATGGACGAGA TGGCCAAGGC CCGCCTGCGC TCGACGCCCA GCGGCGCGGC GGTGCTGGCC GATACGCCGG TTCACTAA
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Protein sequence | MKQFLMTVAG VFVGLVLFLV GVPFLLIVMA ASATRPAPVP AHTVLQLDLR GGLSDQESQN PFAAFSGGGG QSVMSIVETL RRAETDEKVK AVLVRLPEGG MAPASADELR LAFKHFRAVG KKPIFAHSQG LYPSGLVTST YMLGAAASEF WMQPDSSLQA VGAASEEMFF KRFFDKYGVK AEYEQRYEYK NAVNPYLYSD YTPAHRESTL SWMGSVYTSA LTTAAQDRKV DPAALVKTIE AGPYSAEEAK AKGLIDRVGQ VKEVQDAMLS RAGKGAKLID FDDYVSRAKR APIKTGPTIA VVSAEGAIMT GSGSGGSPFG GDSTIYSDQV SKALYDAIDD KDVKAIVFRV SSPGGSDTAS EQILAAVKAA RKAGKPVVVS MGTYAASGGY WISSGASAIV AEPTTLTGSI GVFGGKFALG EALARFGVDT RQVHVGGDYA GAFGTGEGFT PDQRAKFSAW MDRIYAGFVG RVAEGRHLPP ERVREIAKGR VWTGVQAKQL GLVDELGGFY EAVEKAKSLA GLKGEVKLKK IGASNSPFDA LEKVLGVSSA SMRTLAASAW LLGDPRSQSI MDEMAKARLR STPSGAAVLA DTPVH
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