Gene Caul_1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1021 
Symbol 
ID5898476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1081338 
End bp1082504 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content71% 
IMG OID641561503 
Productendo-1,4-beta-xylanase 
Protein accessionYP_001682649 
Protein GI167644986 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3693] Beta-1,4-xylanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.176151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGATA GCGCTCGCGA CACCCCCTCG GTCGCTCCGC GACAGCTCCC CCAAGAGGGG 
AGCATCTATC ACGTCGATCC TCCCCCTTTG GGCGAGGTGG CCCAGAGGGC CGGAGGGAGC
CTTAGCCGCC GCACGGTGCT GATGAGCGCC CTGGCCCTCT CCGCCTGCGG CCCCAAGGCC
CAAGGCCAGC CCATTCCCGG CGACCTGCCC CCGCTCAAGG CGATCGCCCC GTTCCGGATC
GGCAGCTGCG TCCAGGCCCT GCACCTGGAC GATCCCGCCC TGGCCGCCCT GCTGGCCCGT
GAGGTCAACC AGCTGACCCC CGAGTGGGAA ATGAAGATGG AGTACATCGT CCAGCCGGAC
GGCTCCTTCC GCTTCGACGC CCCCGACCGC ATCGCCGCCT TCGCCCGCGC CCACGGCATG
GGCCTGCTGG GCCACACCCT GATCTGGTAC GCCCAGGTCC CGCCGGCGTT CGAGCGGCTG
GACGAGAGCC GCATCAGCTT CGTCGACGCC TATCGCAACT ACATCCTGGC CGTGGCCGGC
CGCTATCGCG GCCAGGCGGT GGGCTGGGAC GTGGTCAACG AGGCGGTGGC CGAGGACGGC
GACGGCTGGC GCGACAGCCT TTGGTCGCAA CGCCTGGGGG ATTTCGAGCA CATCGCCCTG
GCCTATCGGA CCGCGCGCGA GGCCGACCCG CACGCGACCC TGCTGCTCAA CGACTATAAT
CTGGAATACT ACCCCAAGAA GCGCGCGACA TTCCTGAAGC TGGCCGAACG CCTGCTGGCC
TCGGGCGCGC CTCTGACCGG CCTGGGAACC CAGATGCACG TGGCGGCCGA CATCGCCCCG
GGCCAGATCA CCACGATGAT CCGCGAGCTG GCCAGCCTGG GCCTGCCCAT CCACGTCTCC
GAGCTCGACG TCTCCCTGAC CCGGTCGGAG ACCAAGTTCC TGTCGCGCGC CGAGTTGCAG
CGCCGCCAGG CCGCCGTCTA TGCCGAGACC GCCGAGGCGT TCATGGCCCT GCCCCAGCGC
CAACGCTTCG CCTTCACCCT ATGGGGCCTG CGCGACCGGG ATTCCTGGCT GCGGGCGGAA
AACGCCGGCG ACGCCCCCGC GCCGTTCGAC GACGCCGGCC GCCCCAAGGC CGGGGCGGCG
GCCCTGGCCG GGGCGTTCAA GGCCTGA
 
Protein sequence
MDDSARDTPS VAPRQLPQEG SIYHVDPPPL GEVAQRAGGS LSRRTVLMSA LALSACGPKA 
QGQPIPGDLP PLKAIAPFRI GSCVQALHLD DPALAALLAR EVNQLTPEWE MKMEYIVQPD
GSFRFDAPDR IAAFARAHGM GLLGHTLIWY AQVPPAFERL DESRISFVDA YRNYILAVAG
RYRGQAVGWD VVNEAVAEDG DGWRDSLWSQ RLGDFEHIAL AYRTAREADP HATLLLNDYN
LEYYPKKRAT FLKLAERLLA SGAPLTGLGT QMHVAADIAP GQITTMIREL ASLGLPIHVS
ELDVSLTRSE TKFLSRAELQ RRQAAVYAET AEAFMALPQR QRFAFTLWGL RDRDSWLRAE
NAGDAPAPFD DAGRPKAGAA ALAGAFKA