Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_1012 |
Symbol | fliF |
ID | 5898467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 1071994 |
End bp | 1073637 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641561494 |
Product | flagellar MS-ring protein |
Protein accession | YP_001682640 |
Protein GI | 167644977 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.357656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.896317 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGATAAGT TCCTCAGCGC GATTCAAAGG TTCGGTGTCG GCCGTCTGGC CGCCCTGATC GGCGTCGCCG CTGGCGCGAT CGCCGTGATC GCCGCCGTGA TGATGATGAT GAGCAAGCAG CCCAACGAGC TGCTGCTGTC CAATGTCGAC CCCAAGGAAT CCGCGGCGGC GACCCAGGCG CTCGACACCG CCGGCATCAA GTACGAGACC AAGAGCGACG GTTCGACGAT CTATGTCGCC CGCGACAAGG TCAACGCCGC CCGCCAGTTG ATCTTCACCA AGGGCCTGGT GACCTCCGGC TCGGTCGGCT ACGAGATCTT CGACACCGGC AGCGCCCTGG GTCAGACCGA CTTCGTCCAG CAGCTGAACC GCCAGCGCGC CCTCCAGGGC GAGCTGGAGC GCACGATCCA GGGCTGGGAC GGCGTCCGCG CCGCCCGCGT CCACCTGGTC ATGCCCAAGC GCCAATTGTT CGAGGAGGAC GCCGAGCAGC CGACCGCCGC CGTCACCGTC AGCATGGCGC GCGAGCCTTC GCCCGACATG GTCCGCGCCG TCCAGAACCT GGTGGCCGGC TCGGTGGCCG GCATGAAGCC CGACCGGGTC AACGTCATCG ACCAGCATGG CAAGACCCTG TCGGCCGGCA ACGACGAGAG CCTGGCCGGC AAGATGGCCC AGGACGCCAA GAGCGCGACC GAGGCCCGCA TCGCCAAGAC GGTCAAGGAC ATGATCGACG GCGTGCTCGG CCCGGGCAAG GCCCGCGTCA ACGTCACCGC CGACCTCGAC CTGAACCGCG TCACCACCCA GGAGCGCAAG TTCGATCCGG ACGGCCAGGT GATCCGCTCG GAGAGCACCA ACGCGGCCAA CAACAGCGAG ACCAAGAACG ACGACACCGG CGGCGTCACC TCGACCCAGA ACATCCCGGG CCAGACGCCC AACGGCTTCC AGCCGCTGGG CAGCAAGTCG GACAGCAACG AAAGCGTCAC CAACTACGAG ATCTCGGAAA GCACCAAGAC CACGGTCCAG GAGCCGGGCG CGGTCCGCAA GGTCGCCGTG GCCGTGGCCA TCGACGGCGT CGCCGCCCCT CCCGGCAAGG ACGGCAAGCC CGGCGCCTAC ACGCCCCGCA GCGCCGAGGA GATCGCGCAG ATCGAGCAGT TGGTGAAGAC CGCGGTCGGC TTCGACCAGA CCCGCGGCGA CCAGGTCTCG GTGGTCAATG TCCGCTTCCC GCAACCCGAG GACCAGGGCC TGGGCAAGGC GGGCCTGCTG GCCGGCTTCG ACAAGAACGA CATCATGCGC TTCATCGAGC TGGGCGTTCT GGCCGTCGTG GCCCTGCTGA TCCTGTTGTT CGCGGTCCGC CCGTTCCTGA AGAGCCTGAT GACCCCGCCG ACCCCGTTGG GCCTGGCGTT GAACGGGCCG CAGGTGACCC GCATGGTCAC CCTGTCGGAC GGCTCGACCC AGGAGGTCAT CGTCGACCAG TCCGGCGCCT CTATGGCCCT GGCCGCCCCC AGCGACATGG ACCAGCGCAT CGACATCGCC AAGATCGAGG GCCAGGTGAA GGCCTCGTCC GTCAAGCGCG TGGCCGAGTT CGTCGAGAAG CATCCTGACG AATCGGTGGC GATCCTTCGC ACCTGGCTGC ACGAGTCCGA GTGA
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Protein sequence | MDKFLSAIQR FGVGRLAALI GVAAGAIAVI AAVMMMMSKQ PNELLLSNVD PKESAAATQA LDTAGIKYET KSDGSTIYVA RDKVNAARQL IFTKGLVTSG SVGYEIFDTG SALGQTDFVQ QLNRQRALQG ELERTIQGWD GVRAARVHLV MPKRQLFEED AEQPTAAVTV SMAREPSPDM VRAVQNLVAG SVAGMKPDRV NVIDQHGKTL SAGNDESLAG KMAQDAKSAT EARIAKTVKD MIDGVLGPGK ARVNVTADLD LNRVTTQERK FDPDGQVIRS ESTNAANNSE TKNDDTGGVT STQNIPGQTP NGFQPLGSKS DSNESVTNYE ISESTKTTVQ EPGAVRKVAV AVAIDGVAAP PGKDGKPGAY TPRSAEEIAQ IEQLVKTAVG FDQTRGDQVS VVNVRFPQPE DQGLGKAGLL AGFDKNDIMR FIELGVLAVV ALLILLFAVR PFLKSLMTPP TPLGLALNGP QVTRMVTLSD GSTQEVIVDQ SGASMALAAP SDMDQRIDIA KIEGQVKASS VKRVAEFVEK HPDESVAILR TWLHESE
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