Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0527 |
Symbol | |
ID | 5897982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 576571 |
End bp | 577404 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641561010 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001682159 |
Protein GI | 167644496 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.281211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCCC AGAGATTGCA GGGAAAGATC GCCATCGTCA CCGGCGCCGC GCGCGGCCTT GGAGCCGCCA TCGCCAAGCG CTACCTTGAG GAAGGCGCCA CCGTCGTTCT GGCCGACCTG TCCGAGGAAA AGACCACTGA GCGCGCCGCC GAACTGGGCG CGGGCGCCCA CGGTCGTCGA TGCGATGTCG GCGATTGGGA GGCGTTCAGT ACGCTCATCG ACGCGACCGT GGCCGAGTTT GGCCGTCTGG ACATTCTCGT CAACAACGCT GGCATCAACC GAGCAGGCCT CGTACCGGGT TTCAGCCTGC AGCATTGGGA CGATCTGCTG AGGGTCAATG TCAGCTCGGT CTTCTATGGC TGCCGAGCCG CCATTCCGCA CATGCGCCGG CAGGGCGGAG GGGCCATCAT CAACGTCGCC TCCATCGCCG GTCTTCGCGG TGAAACCCTG GCTGCGGCCT ATTCGGCGAG CAAGGCCGCC GTGGTCAATT TCACGCGTTC GCTGGCGCTA GATCACGCCG ACGAGAACAT TCGCGTCAAT GCCATTTGCC CTGGCAGCGT CGAGACCGAG ATGAATAATC TCATGATGTC GCGGCCCGAC TATATAGCCC AATGGATCAA GACCATTCCA GCCAATCGGT TCGGACGGCC CGACGACGTG GCGGCTTTGG CCGCCTTCCT GGCTTCGGAC GACGCCAGTT TCATCGTCGG CCAAGCCATC CCCGTCGATG GCGGCACGAG CGCGCGCATG GCTCAACCCA ACTGGCTGCA TCTGGCACGC GAAGCGGGTG TTCTTCGTGA AGGCAGCTTC GATACCGAGG GCGCTGCGTC CTAG
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Protein sequence | MQAQRLQGKI AIVTGAARGL GAAIAKRYLE EGATVVLADL SEEKTTERAA ELGAGAHGRR CDVGDWEAFS TLIDATVAEF GRLDILVNNA GINRAGLVPG FSLQHWDDLL RVNVSSVFYG CRAAIPHMRR QGGGAIINVA SIAGLRGETL AAAYSASKAA VVNFTRSLAL DHADENIRVN AICPGSVETE MNNLMMSRPD YIAQWIKTIP ANRFGRPDDV AALAAFLASD DASFIVGQAI PVDGGTSARM AQPNWLHLAR EAGVLREGSF DTEGAAS
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