Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0479 |
Symbol | |
ID | 5897934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 520198 |
End bp | 521793 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641560962 |
Product | TRAG family protein |
Protein accession | YP_001682111 |
Protein GI | 167644448 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.903949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCGA CACGCATCCT TTGGGCGCCG GTGATCGTCG TCTTCGTCCT GGTCCTGGCG ACGACCTGGG GCGCGACCCA GTGGACGGCC AACGCCCTGG GCTACCAGCC CGAACTTGGC GCGCCCTGGC TGATCATCGG CGACCATCGC CTCTATCCGC CGCCCGCCTT CTTCTGGTGG TGGTTCGCCT ATGACGCCTA TGCGCCGCGC ATCTTCCTGC AGGGCGCGGC CATCGCCGTC TCGGGCGGCC TGCTGTCCCT CGTCGCGGTC ATCGGCATGG CGGTATGGCG GGCTCGGGAG AGCGGCAAGT CCAGCGCGTT CGGCACGGCG CGGTGGGCGA TCCCACGTGA GGTCCGCGCC GCCGGACTGC TCGGTCCCGA CGGCGTGATC CTGGGGCGCC TCGACAAGGC CTATCTGCGC CATGATGGCC CCGAGCATGT ATTGTGCTTT GCCCCGACGC GCTCGGGCAA GGGTGTGGGC TTGGTCGTTC CCAGCCTGCT GACCTGGCCC GGCTCGGCGA TCGTCCATGA CATCAAGGGC GAGAACTGGA CCCTGACGGC CGGCTTTCGC GCGACGTTCG GCAAGGTCCT GCTGTTTGAT CCGACCAACC CCGGGTCCTC GGCCTACAAT CCCCTGCTGG AGATCCGGCG CGGCGTCTTC GAGGTGCGCG ACGTTCAGAA CGTGGCCGAC ATCCTGGTCG ATCCGGAAGG TTCGCTCGAC AAGCGCAGCC ACTGGGAAAA GACCAGTCAT TCTCTGCTGG TCGGGACGAT CCTCCACGTC CTCTATGCCG AACCGGACAA GACCTTGGCC GGGGTCGCGG CCTTCCTGTC CGATCCGCAA CGGACGATCG AACAGACGCT CGATGCGATG ATGCGCACGC CGCATCTGGG GGCGGACGGG CCGCACCCCG TCGTCGCCAG CGCGGCGCGC GAACTCAAGA ACAAGAGCGA CAACGAACGC TCCGGGGTCT TGAGCACGGC GATGACCTTC CTGGGTCTCT ATCGCGACCC GACGGTGGCC CAGGTGACAC GGCGCTGCGA CTGGCGTATC GCCGATCTCG TCGATGGCGG ACCCTGCACC CTCTACCTGG TGGTTCCGCC CTCGGACATC AGCCGGACCA AGCCGCTGGT GCGACTGCTG CTCAACCAGA TCGGCCGTCG CCTGACCGAA CAGTTGGCTG ACACCGCTGG CCGCCAGCGG GTGCTGCTGA TGCTCGACGA GTTTCCGGCC CTGGGGCGCC TGGACTTCTT CGAGAGCGCC CTAGCCTTCA TGGCCGGCTA TGGCCTCAAA GCATTTTTGA TCGCCCAATC GCTTAGGAGC GCGCTGGATG TTCTCCGCCA GGCTGTCCTC CTCGGCCAGA CCCTCGGTGC GGACCACGCA GGGGATCAGG GCGTTGCGGG CCAGACGCTT CTGCTTGACC AGCAGTTCCA GAGCTCGATA GCGCCGGCCG CCGGCCGGGA TCTCGAACAT GCCGGTCTCG GCGCCGCCGG CGTCCAGCAC GGGCCTAACG CTCAGCCCGT GCAACAGCGT GCGCCGGGCA ATGTCGTCGG CCAGTTCGTC GATCGACACG CCGGCCTTGG TGCGGCGGAC ATTTGA
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Protein sequence | MSATRILWAP VIVVFVLVLA TTWGATQWTA NALGYQPELG APWLIIGDHR LYPPPAFFWW WFAYDAYAPR IFLQGAAIAV SGGLLSLVAV IGMAVWRARE SGKSSAFGTA RWAIPREVRA AGLLGPDGVI LGRLDKAYLR HDGPEHVLCF APTRSGKGVG LVVPSLLTWP GSAIVHDIKG ENWTLTAGFR ATFGKVLLFD PTNPGSSAYN PLLEIRRGVF EVRDVQNVAD ILVDPEGSLD KRSHWEKTSH SLLVGTILHV LYAEPDKTLA GVAAFLSDPQ RTIEQTLDAM MRTPHLGADG PHPVVASAAR ELKNKSDNER SGVLSTAMTF LGLYRDPTVA QVTRRCDWRI ADLVDGGPCT LYLVVPPSDI SRTKPLVRLL LNQIGRRLTE QLADTAGRQR VLLMLDEFPA LGRLDFFESA LAFMAGYGLK AFLIAQSLRS ALDVLRQAVL LGQTLGADHA GDQGVAGQTL LLDQQFQSSI APAAGRDLEH AGLGAAGVQH GPNAQPVQQR APGNVVGQFV DRHAGLGAAD I
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