Gene Caul_0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0183 
Symbol 
ID5897895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp199040 
End bp200728 
Gene Length1689 bp 
Protein Length562 aa 
Translation table11 
GC content66% 
IMG OID641560667 
ProductFlp pilus assembly protein TadG 
Protein accessionYP_001681818 
Protein GI167644155 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.44527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCATGA CCATGTGGAA ACGCCTCGTA ACGCGGCTCG TGACGCGGCT GGGCGCCGAC 
GAGCGCGGGG CCATCGCGGT GCAGTTCGCG CTGCTGCTGA TCCCCATCGC CGTCCTGACC
TTCGGCCTGA TCGACATCAG CCGGGCCAGC GTCCAGAAGC GCCAGCTGCA GGACGCCCTC
GACGCCGCCA CCCTGATGGC CGCCCGCTCG ACGGCGACCA CCAACGCCGA CCTCGACACC
ATCGGCGACG CCGCCCTGGC CACCGAGATG GCCGGCCTGG GGGTGACCTT CGGCCCCGGC
AATTCGTCTT TCGTGCTGGG CGACAACAAC ACCGTGGTCG GCACGATCCA GAACGTGGTG
ATCAAGCCGA TCATCTCCAA TCTGTGGAGC TCCACGAACA CCCCGGTCTC GGCCACCGCC
ACCGTGATGC GCTCGATCAA CCACCTGGAA GTGGCCCTGG TGCTGGACAA TACCGGCTCG
ATGGCCAGCA GCCTGGGGTC GGGCGGCAGC AAGATCACCG CGCTGATCAC GGCCTCGAAA
TCGCTGGTCG ATGTGCTCTC CGCCGCCGCG GCGCGGGCCA CCGAGGCGGA CGCGGTGAAG
ATCAGCGTCG TTCCCTTCTC GATGACCGTC AACATTGGCT CGACCTACCA GACCCAAACC
AGCTGGCTCA CGGGGACCCA GCCCGCCGCG TATGGCGTGG ACAATTTCGC CACCAGCCAG
AACCGCTTCA CCCTGCTGTC GAACCTGGGG TTGACCTGGG GAGGGTGCGT TGAAAGCCGC
CCCGCGCCGT TCGACGTCAC CGACGACGCC CCCAACCCCG CGATCGGCGC CTCGATGTTC
GTGCCGTTCT TCGCCCCGGA CGAGCCTGAC GACAATACGG TCAATATCAG CGCGTCCAGC
TCGACCAAAT ATCGTGACGC TCGACGCTAC AGCACCTCGT ATCCGATCAC GAACACCTAT
CTGACGGACA CGGTCACACC GACCGGCACC GCGACCAACG CCTGGAGCAC CCGCTCGACC
GTGGTCGCCA AGTACGCGAC GAGCAACAAG GCCACCTTGC TGAGCCTCGC CAAGACCGGC
ACCGCCTACG GCCCCAACGC CGGCTGCGGC ATGACCAGCC TGATGCGCCT GACCAACGTC
AAGGCGAAGG CCGACCGCGA CACGGTGAAG GGCAAGCTCG ACCAGATGAT CGCCAGCGGC
AACACGAACG TGGCCATGGG ACTGATCTGG GGCTGGCACA CCCTGTCGAA GAACGCGCCG
TTCGCCGACG GCGTCGATCC GGCCACGACG GTCGGCAAGA GGACCACCAA GGTCATCGTG
CTGCTGACCG ACGGCGACAA TACCAACGAC ACCTACAACA ATCCCAACGC CTCGATCTAT
ACGGGCTACG GCTACATCAC CCAGGGTCGC CTGCTCAACG CCAGCAACAG TCCCTTGGGC
GCCACCTCCA CGGCCACCAA CCGCCGCGAT GCGATCGACA GCCGCGAAGC CAGGGCCTGC
ACCAACGCCA AGGCCGCCGG CGTGCAGATC TACGCGATCG GCGTGGGGGT CTCGTCGCAC
TCCAGAGGCA TCCTGCAGGA CTGCGCGAGC AAGCCGGAGA TGTATTACGA CGTCACCGAC
GCGGCCCAGT TGGCCTCGGT GTTCAACACC ATCGCCGGCT CGATCCAGAA CCTGCGGATC
ACGAAATAG
 
Protein sequence
MLMTMWKRLV TRLVTRLGAD ERGAIAVQFA LLLIPIAVLT FGLIDISRAS VQKRQLQDAL 
DAATLMAARS TATTNADLDT IGDAALATEM AGLGVTFGPG NSSFVLGDNN TVVGTIQNVV
IKPIISNLWS STNTPVSATA TVMRSINHLE VALVLDNTGS MASSLGSGGS KITALITASK
SLVDVLSAAA ARATEADAVK ISVVPFSMTV NIGSTYQTQT SWLTGTQPAA YGVDNFATSQ
NRFTLLSNLG LTWGGCVESR PAPFDVTDDA PNPAIGASMF VPFFAPDEPD DNTVNISASS
STKYRDARRY STSYPITNTY LTDTVTPTGT ATNAWSTRST VVAKYATSNK ATLLSLAKTG
TAYGPNAGCG MTSLMRLTNV KAKADRDTVK GKLDQMIASG NTNVAMGLIW GWHTLSKNAP
FADGVDPATT VGKRTTKVIV LLTDGDNTND TYNNPNASIY TGYGYITQGR LLNASNSPLG
ATSTATNRRD AIDSREARAC TNAKAAGVQI YAIGVGVSSH SRGILQDCAS KPEMYYDVTD
AAQLASVFNT IAGSIQNLRI TK