| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_0144 |
|---|
| Symbol | |
|---|
| ID | 5897856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 159878 |
|---|
| End bp | 161485 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641560629 |
|---|
| Product | Alpha,alpha-trehalase |
|---|
| Protein accession | YP_001681780 |
|---|
| Protein GI | 167644117 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1626] Neutral trehalase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.994259 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCATC GCCGCCTACT CGCCTCCGCA ATCTGGCTGG CCATCGCCTC CCCGGCCATC
GCCCAGACCG CGACGCCCAA GACCAGCGAG ATCCCTTCTC CCGCCGACAC CTATGCCGAG
CTGTTCCACC AGGTGCAGAT GCGCAAGCTG TTCCCGGACG GCAAGACCTT CGTCGACGCC
ACGCCGAAGC GTCAGCCGGG CCAGATCCTG GCCGCCTACC GCGCCCACGC CGCCTTCACC
GACGCCGAGT TGAAGCGCTT CGTGCGGGCC AACTTCGCCG TACCGGAAAG CGCGCCGCTG
CCGTCCCCCT CCAAGGACCG CACCACCCTG AAGGCCCACA TCGCCGCCCT GTGGCCGGTG
CTGACCCGCC CGCCGGTCAA GGCGGTGGAG GGCGACAGCG CCCTGCCGCT GGACAAGCCG
TTCGTGGTGC CGGGCGGGCG CTTTCGCGAG ATGTATTACT GGGACAGCTA TTTCACGCTG
CTGGGCCTGG CCGCCGACGG CAAGACCGAG GCGGTCGAGA ACATGGTCGA TGATTTCGGC
GGGCTGATCG ACCGCTACGG ACACATCCCC AACGGCACGC GCACCTACTA TCTCAGCCGC
TCGCAGCCGC CGTTCTACTT CGCCATGGTG GGCCTCGCTC AGAAAGATGG GGCCGACAAG
ACCGACAAGG CGCGGTTCAA GGCCCGCCTC GACCTGATGC GCCGCGAGCA CGCCTTCTGG
ATGGACGGCG AAAAGAGCGT GAGGCCGGGC CAAGCCTGGC GCCGCGTTGT CGCCCTGCCC
GACGGGGCGA TCCTGAATCG CTACGCCGAC GACCGCGCCA CCCCGCGCGA CGAGTCCTAT
CGCGAGGACG TGCTGACGGC GCGGGAAGTC ACCAGCCGTC CGGCCGGCGA TGTCTTCCGC
GACCTGCGCT CGGGGGCCGA GAGCGGCTGG GACTTCAGCT CGCGCTGGAT GGCCGACGGC
CAGAGCCTGA AGACCATCCA GACCACCAGC ATCGTGCCGG TCGACCTCAA CAGCCTGATG
TACGGCCTGG AGACGGCGAT CGCCCAGGGC TGCGCCGAGC TGGTGGACGC GCCCTGCGTC
GCCGAGTTCA GCGACCGCGC CAAGGCCCGC AAGACGGCCA TGGACGCCTA TCTCTGGGAC
GCCCCGCGCG GCCTGTATCT CGACTACCAG TGGCGCGACC ATGGACGGCT GGATCACCCC
AGCGCCGCGA CGCTGTATCC CCTGTTCGTC GGCGCCGCGA GCCCGGACCA GGCCAGGGCC
GTGGCGGCGA CGACCCGCGC CCTGCTGCTG GCCCCCGGCG GCCTGCGCAC CACCACCGCC
TCGACCGGTC AGCAATGGGA TACACCCAAC GGCTGGGCTC CCCTGCAATG GGTGGCGGTG
TCGGGCCTGC GCCGCTATGG CGAGGAGGCC CTGGCCAGGG ATATCGGCCA GCGCTGGCTG
GCCACCGTCC AGCGCGAGTA CCAGGCCAGC GGCAAGATGC TGGAGAAGTA CGACGTCGAG
GAGGCCAAGG CCGGGGGCGG CGGCGAGTAT CCGTTGCAGG ACGGCTTTGG TTGGACCAAC
GGGGTGACGC GGGCGCTGCT CGATCTCTAT CCGGCGGCGG CGCACTAG
|
|---|
| Protein sequence | MKHRRLLASA IWLAIASPAI AQTATPKTSE IPSPADTYAE LFHQVQMRKL FPDGKTFVDA
TPKRQPGQIL AAYRAHAAFT DAELKRFVRA NFAVPESAPL PSPSKDRTTL KAHIAALWPV
LTRPPVKAVE GDSALPLDKP FVVPGGRFRE MYYWDSYFTL LGLAADGKTE AVENMVDDFG
GLIDRYGHIP NGTRTYYLSR SQPPFYFAMV GLAQKDGADK TDKARFKARL DLMRREHAFW
MDGEKSVRPG QAWRRVVALP DGAILNRYAD DRATPRDESY REDVLTAREV TSRPAGDVFR
DLRSGAESGW DFSSRWMADG QSLKTIQTTS IVPVDLNSLM YGLETAIAQG CAELVDAPCV
AEFSDRAKAR KTAMDAYLWD APRGLYLDYQ WRDHGRLDHP SAATLYPLFV GAASPDQARA
VAATTRALLL APGGLRTTTA STGQQWDTPN GWAPLQWVAV SGLRRYGEEA LARDIGQRWL
ATVQREYQAS GKMLEKYDVE EAKAGGGGEY PLQDGFGWTN GVTRALLDLY PAAAH
|
|---|
| |