| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3801 |
|---|
| Symbol | |
|---|
| ID | 7267875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 4637015 |
|---|
| End bp | 4638109 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643568609 |
|---|
| Product | chorismate synthase |
|---|
| Protein accession | YP_002465073 |
|---|
| Protein GI | 219850640 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0082] Chorismate synthase |
|---|
| TIGRFAM ID | [TIGR00033] chorismate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.209902 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.33378 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGGAA ATAGCTTTGG TCACGTCTTT CGGCTGACAA CGTGGGGTGA ATCGCATGGC
CCGGCAGTGG GGTGTACCGT AGATGGTTGC CCGGCCGGGT TGCCGCTCGA TGTGGCCGAT
ATTCAACGCG AACTCGACCG GCGGCGGGTT GGTCAAAGCC GGGTCAGTTC GCAACGGCGC
GAAGCTGATG AGGTACAGAT ACTCTCCGGT GTGTTTGAGG GTCGCACCAC CGGAACGCCG
ATAACGATGG TTGTTTACAA TACCGATGCC AAATCTCACC ACTACGATAC TATCAAAGAC
GCCTACCGTC CCGGTCACGC CGATTATACG TGGGACGTAA AATACGGTTT TCGGGATTGG
CGTGGTGGTG GGCGTTCGTC AGCCCGCGAG ACGATTGGGC GGGTAGCCGG TGGTGCAATT
GCGCGCAAAC TGTTGGCGAC GGTGGGGGTA ACAATTGTAG GGTATACCCT CCAACTAGCC
GATTTGCGCG CCGAGGTCTT TGATGAAGCA GAGATCGAAC GCAACATCAT GCGGTGCCCT
GATGCGCGGG TGGCGGCGTT GATGGTTGAA CGTGTCGATC AGGCGCGTCG CGAACTCGAT
TCGCTGGGTG GGATCGTTGA AGTCCGGGCG CGAGGTGTAC CTCCCGGCCT CGGTGAGCCG
GTGTTTGATA AGCTCCAAGC CGATATCGGT AAGGCCATGT TCTCGATTCC GGCTATCAAA
GGAGTGGAGA TTGGTGAAGG GTTTGGGGTG GCAATGCTGC GTGGCTCGCA GAACAACGAT
CCCTTCATCC GGCGCGAGGA TGGTTCAATC GGTACGACCT CGAACCATCA CGGCGGTATT
CTCGGCGGCA TTTCAACCGG CGAAGAGATC GTGGTACGAT TGGCAGCCAA ACCACCGGCC
AGTATTGCCC GCCCACAACA AACGGTCGAC CGCGACGGTA ACCCGGTAAC GATTGAGGTG
CATGGTCGCC ATGACCCAAC GGTCTTGCCG CGTCTCGTGC CGGTGGCCGA AGCTATGCTG
GCGTTGGTGC TGGCCGATCA TCTGTTGCGA CAGCGGCTTG CTCGGGTGTC GTGGTCGGAG
CGTGATGATG GGTAA
|
|---|
| Protein sequence | MPGNSFGHVF RLTTWGESHG PAVGCTVDGC PAGLPLDVAD IQRELDRRRV GQSRVSSQRR
EADEVQILSG VFEGRTTGTP ITMVVYNTDA KSHHYDTIKD AYRPGHADYT WDVKYGFRDW
RGGGRSSARE TIGRVAGGAI ARKLLATVGV TIVGYTLQLA DLRAEVFDEA EIERNIMRCP
DARVAALMVE RVDQARRELD SLGGIVEVRA RGVPPGLGEP VFDKLQADIG KAMFSIPAIK
GVEIGEGFGV AMLRGSQNND PFIRREDGSI GTTSNHHGGI LGGISTGEEI VVRLAAKPPA
SIARPQQTVD RDGNPVTIEV HGRHDPTVLP RLVPVAEAML ALVLADHLLR QRLARVSWSE
RDDG
|
|---|
| |