Gene Cagg_3774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3774 
Symbol 
ID7267847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4601958 
End bp4604450 
Gene Length2493 bp 
Protein Length830 aa 
Translation table11 
GC content54% 
IMG OID643568581 
ProductNucleotidyl transferase 
Protein accessionYP_002465046 
Protein GI219850613 
COG category[G] Carbohydrate transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1109] Phosphomannomutase
[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCG TTGTGATGGC CGGCGGCGAG GGCACTCGCC TGCGACCGCT CACGATAAAT 
CGCCCGAAAC CGATGGTATC ACTGGTCGAC CGACCGGTGA TGCAACATAT CATTGAATTA
CTCAAACTGC ACGGTATCAC CGACATTATC ATTACCGTGC AGTACCTGGC AAATGTTATT
CAAGACTACT ACGGTGACGG CAGCGCGTAT GGCGTCAATA TTACCTATTC GCTGGAAGAG
GTACCGTTGG GCACGGCCGG TAGTGTCAAA AATGCCGAGC ACTTGCTCAC CGAACCTTTC
CTCGTTATAT CCGGTGATGC TCTGACCGAT TTTAACCTGA CGCAGATCAT CGAGTACCAT
ATGGCCTCCG GTGCGACCGC AACCGTCACC CTCACCCGCG TCGCTAATCC ACTTGAATAC
GGCGTGATCA TCACCGACGA ACAAGGCCGC ATCCGTCAGT TGCTCGAAAA ACCGAGCTGG
GGAGAGGTCT TTTCCGATAC CGTCAATACC GGTATTTACG TCTTCAATCC CGATATCTTT
AGTTACATTG AACGAGGCCG CGTCACCGAC TGGTCGAAAG ATGTCTTCCC GCGTATGTTG
CACCGCGGTG ATCGACTATA CGGGTATATC GCCAATGGGT ATTGGACCGA TGTCGGTACT
ATCGAGGCCT ACATGCGCGC TTGCAGCGAT TATCTGTCGG GTAAAGTCAA TCTACCGCGC
ATCGGTCACA ATATCGGTGG CGACATCTGG ATTGATCGCG ATGCCGAAAT CGCTCCCGAT
GCCCAACTGC ACGGCCCGAT CTACCTTGGT CACGGGGCCA AGATTAAAGG GGGGGTGATT
ATTCACGGGC CATCGGTGAT CCGTGACTAC ACTATTGTCG ATTCACGAGC CAATATCGAT
CGCTCGATCA TTTGGCGTAA CTCGTACATC GGTGAACGGG CCGAGCTGCG TGGTGCGATT
GTGCTACGCC AGTGCAACAT TCGCTCCCGG GCAATGATCT TCGAGGGAGC TGTGATCGGC
GATGGAGTTC AGATCGGCGC CGGCGCAGTG GTGCAACCAA ACGTTAAGAT TTGGCCCTCC
AAAGAGGTGG ATGAAGGCGC AACTGTTACG TCAAGTATCA TTTGGGGGAG CCAAGGGCGC
CGCGTGCTGT TTGGCCGCTA TGGGATTACC GGTTTAGTTA ATATCGAGAT TACGCCTGAA
ATGTGTGCCC GGCTCGGTGC AGCTTACGGT GCGACGCTAC CGCGTGGCAC TACGGTGACG
ATTAACCGCG ATGCTCATTT TACCCCTCGC ATGCTGAAGC GTGCAATTAT TGCCGGTTTG
CCTTCGGCGG GGGTGAATGT CTGCGATCTG CGCAATGTAC CAATCCCATT AGCCCGCTAC
TATACCCATG CGATTGGCGC CGCCGGCGGT GTCCATGTCC GAATCTCACC GTTTGATAAC
CGGGTTGCCG AGATCAAATT CTTTAATCAT CTCGGACTGG ACATCAATAG TACGACCGAG
CGTAAAATCG AGAGTACGTT CTTCCGGGAA GATTACCGAC GTGCCTATCT TGATGAAATC
GGCCGCATTT TCTACGGCGA AGATGTAGAA GAGACGTACC GAGCCGCGTT TATGAAAGCC
CTTGGCCAAA ATGCTGCCTT TGGCAAGGGA TTTCCGATCG TGATCGATTA CGCGAATACC
AGTACCAGTA CGGTCATGAC CGAGATTCTG CGTCGGATGC AGGCCGATGC CGTCGAACTG
AACGTCTATC TCGATGAACG GATGGTGTTT CAGACCGGTG CAGAGTTTGA GGCCGCAATG
ACGCGATTGA CCAAAATCAC GCCGGTGGTT GGCGCACAGT TCGGGGTCCG TCTTGATCCC
GGCGGCGAGA AGATTTTTCT CATCGATGAT CGTGGTCAAC GTTTGCATCC ACTCCGTACG
TTGGCCGCCA TGACGGCGCT CTCGATGCGC GCACACGGTG GTGGGATCGT TGCCGTCCCG
GTGACAGCAC CCCGTGCCTT TGAACAGATT GCCGCACGGT ATGGCGGAAG TATCATTCGC
ACGCGCGCTA ACCTCGGCGC ATTGATGAAC CTCGCTGCCG AACGGCCTGA CCTCTTGCTC
CTTGGTGATG GTACCGGTAA CTATATCTTC CCCCATTTCT ACCCCGTCGC CGACGGCATG
TTTGCAATTG CACGGTTGAT GGAACTGCTC ACGCTCAATC AAACAACTCT GAGTGAGGTT
CTGGCCGATC TCCCACCATA CTATATTTGG CAAACCCGTG TGCCGTGTCG CTGGGAAAGC
AAAGGCAAAG TGATGCGTAT TCTCAATCAA CAATACCACG AACGACACGG CGAACAGATT
GACGGAATCA AAATTGAATT GGGACAAGAA TGGGTCCTTA TTTTACCCGA CCCCGATGGA
CCATTTTTTC ACGTCATTGC TGAAGGTGGT AGCGAAGAGC ACGCCCGCAT ACTGACCGAT
AAATATGCCG GGCTGGTGAC GAGCTTGCAG TAG
 
Protein sequence
MKAVVMAGGE GTRLRPLTIN RPKPMVSLVD RPVMQHIIEL LKLHGITDII ITVQYLANVI 
QDYYGDGSAY GVNITYSLEE VPLGTAGSVK NAEHLLTEPF LVISGDALTD FNLTQIIEYH
MASGATATVT LTRVANPLEY GVIITDEQGR IRQLLEKPSW GEVFSDTVNT GIYVFNPDIF
SYIERGRVTD WSKDVFPRML HRGDRLYGYI ANGYWTDVGT IEAYMRACSD YLSGKVNLPR
IGHNIGGDIW IDRDAEIAPD AQLHGPIYLG HGAKIKGGVI IHGPSVIRDY TIVDSRANID
RSIIWRNSYI GERAELRGAI VLRQCNIRSR AMIFEGAVIG DGVQIGAGAV VQPNVKIWPS
KEVDEGATVT SSIIWGSQGR RVLFGRYGIT GLVNIEITPE MCARLGAAYG ATLPRGTTVT
INRDAHFTPR MLKRAIIAGL PSAGVNVCDL RNVPIPLARY YTHAIGAAGG VHVRISPFDN
RVAEIKFFNH LGLDINSTTE RKIESTFFRE DYRRAYLDEI GRIFYGEDVE ETYRAAFMKA
LGQNAAFGKG FPIVIDYANT STSTVMTEIL RRMQADAVEL NVYLDERMVF QTGAEFEAAM
TRLTKITPVV GAQFGVRLDP GGEKIFLIDD RGQRLHPLRT LAAMTALSMR AHGGGIVAVP
VTAPRAFEQI AARYGGSIIR TRANLGALMN LAAERPDLLL LGDGTGNYIF PHFYPVADGM
FAIARLMELL TLNQTTLSEV LADLPPYYIW QTRVPCRWES KGKVMRILNQ QYHERHGEQI
DGIKIELGQE WVLILPDPDG PFFHVIAEGG SEEHARILTD KYAGLVTSLQ