Gene Cagg_3749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3749 
Symbol 
ID7267822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4567520 
End bp4568242 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content56% 
IMG OID643568556 
ProductLrgB family protein 
Protein accessionYP_002465021 
Protein GI219850588 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1346] Putative effector of murein hydrolase 
TIGRFAM ID[TIGR00659] conserved hypothetical protein TIGR00659 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGACC GAATTTTTTC AATCTGGGTA TATTTAGCCC AAACTCCACT GCTCTGGCTC 
ACCACGACCA TCGCCATCTA TCGCCTCATG ACGATTATCA GCCGCAAATT GGGTTCACCG
CCGTTCCTCA ATCCTGTTCT CTTATCAATT ATTGCGCTGG TCAGTATCTT GCTTGTCACC
GACACCCCGT ATGCCACCTA CTTCGACGGT GCCCAGTTCG TCCACTTTCT GCTTGGACCG
GCGACGGTTG CACTGGCCAT TCCGCTCTAC GAAGCTGAAC GAGTGCTTCG TCGGATAATG
TGGCCGGCGC TCATTGGTCT CTTCGTCGGT TCGGCGACCG GTATCACTGC GGCCGTCCTC
ATTGGCAGGC TCATGGGGCT ATCTGAAGCA ACATTACGTT CCCTCGCACC CAAATCGATC
ACGACACCCA TTGCGATGGG CATTGCCGAA CAACTAGGCG GCCTACCCTC ACTGACGGCC
GTTATTGTCA TCGTCACCGG TATGGTGGGG GCGCTGTTCG GCTGGGAACT ACTCAGCCTG
GTAGGTGTCC GCGATGATAG TGAACGAGGC TTTGCCCTGG GCTTAGCCTC ACACGGTCTG
GGCACCGCAC GTTCCCTGCA ATTCAGCAGT GAAGCAGGGG CCTTAGCCGG TTTGGCGATG
GGGTTAAACG GCGCACTAAC GTCGCTCCTC GCGCCATTAC TGGCACGCTG GCTCGGATTA
TGA
 
Protein sequence
MDDRIFSIWV YLAQTPLLWL TTTIAIYRLM TIISRKLGSP PFLNPVLLSI IALVSILLVT 
DTPYATYFDG AQFVHFLLGP ATVALAIPLY EAERVLRRIM WPALIGLFVG SATGITAAVL
IGRLMGLSEA TLRSLAPKSI TTPIAMGIAE QLGGLPSLTA VIVIVTGMVG ALFGWELLSL
VGVRDDSERG FALGLASHGL GTARSLQFSS EAGALAGLAM GLNGALTSLL APLLARWLGL