Gene Cagg_3700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3700 
Symbol 
ID7268236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4496762 
End bp4497676 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content60% 
IMG OID643568507 
Productdiacylglycerol kinase catalytic region 
Protein accessionYP_002464972 
Protein GI219850539 
COG category[I] Lipid transport and metabolism
[R] General function prediction only 
COG ID[COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 
TIGRFAM ID[TIGR00147] lipid kinase, YegS/Rv2252/BmrU family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00128182 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAACGA CAGTCATCTT GAATCCGGCG GCGGGTCGCG GTCTAGCCGG ACGACGACGG 
AACGCCATTG AAGCAGCCTT ACGCGATCAC GCCATTGAGT ACGAGATCGT GACTACCCAC
GCCCGCGGTG GCGCAACTGA ATTGGCGATT CAAGCCATTC AGCGCGGCGC CGAGCGGGTC
GTCGCAGTGG GTGGTGACGG CACGATCAAC GAAGTCGTCA ATGGAATCAT CGATAGCCGC
ACCGGCAACA AGGTCGCACT CGGGATTATT CCACTGGGTA CCGGCAGTGA TTTCGTCAAA
TCACTGCCCG GCGTGCGTCC GGGAGATATT GCCGGTGCAG TGCAACGGCT GGCCAGCAAC
CACACACAGG CGATTGATGT AGGCCGGATT CGAGTTACAG CCGGTCGCTT GACGTTGCAG
CGCTGTTTCA TCAACGGTCT TGGGATGGGC CTTGACGCAG CAGTAGCCGT CGAAAGCCTG
AAGATCAAAT GGCTGCGTGG GTTTGCCGTG TACCTGATCT CGGTGTTCAA GGCGCTCGCT
ACTTATCGAC CGGGCCCAAT GACGGTACGC TTCGATGGGC AACGGGTAAG TCGTCAGCTT
TTCTTTGCCA GTGTTGGTAA TGGCCGGTGC CAGGGCGGTG GTTTTTGGAT GACACCGGAC
GCGAAATTGG ACGATGGTCT GCTCGATCTG TGCATCGTCG ACACAATGCC GATCTCACGT
GCGCTGCGCA AGATTCCGCT GTTGATGCGC GGGGTGCATA CTAACGAGCC GGAAGTGACG
ATGGCCCGCG CTCGTCGGAT TGAGGTGACG TGCCCGACGC CGATCCCGGT CGCGACCGAT
GGGGAAGTGA TCGCAACGGC GGCGCAGCGG GTTGAGGTCG AAGTGCTGCC GCGAGCCGTG
CAATTGGTGG TATGA
 
Protein sequence
MTTTVILNPA AGRGLAGRRR NAIEAALRDH AIEYEIVTTH ARGGATELAI QAIQRGAERV 
VAVGGDGTIN EVVNGIIDSR TGNKVALGII PLGTGSDFVK SLPGVRPGDI AGAVQRLASN
HTQAIDVGRI RVTAGRLTLQ RCFINGLGMG LDAAVAVESL KIKWLRGFAV YLISVFKALA
TYRPGPMTVR FDGQRVSRQL FFASVGNGRC QGGGFWMTPD AKLDDGLLDL CIVDTMPISR
ALRKIPLLMR GVHTNEPEVT MARARRIEVT CPTPIPVATD GEVIATAAQR VEVEVLPRAV
QLVV