Gene Cagg_3604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3604 
Symbol 
ID7269748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4380879 
End bp4381817 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content58% 
IMG OID643568412 
Productband 7 protein 
Protein accessionYP_002464878 
Protein GI219850445 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.10521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAAG GTCGTCAATC GTTTCCAACT CCTCCGATGC AGGGCTGGTC ATTGTCAGCC 
CTTATCTCGC TCGTCTTTAT CATCATGGTT GCGAGCCTTT TGGTCAGCAA CTCCATCACT
ACCATCGAAG CCGGCACTCG CGGTGTCTTG AAGACGTTTG GCGAGATTAC CGGTGTGCTC
GATGAAGGAT TACACTTCCG TATGCCGTTC ATCACGTCGG TGACGGTAGT TGAAGTGCGC
ACGCAGCGCT ACGAGTCGAA TTCAAGTGCT GCATCGCGCG ATTTACAGAC GGTGACAACG
CAGGTAGTGA TTAACTACCG CCCTGATGCT ACCCAAGTTG ACCGGCTGGT GCGCGAGATC
GGGGTTGATT ACGAGCGTCG GGTGGTCGAT CCGGCAATTC AAGAGGCGAT TAAAGCGGCT
ACCGCTCGCT TCACCGCCGA AGAGCTGATC ACCCGCCGAC CTGAAGTGTC GGATTTGATC
CTGAGTGTGC TGAGCGAGCG ATTGATGCCG CGCGGCGTGA TCGTTGAGAA TGTCTCGATC
ACCGATTTTA ACTTCAGCCC CGAATTTGCC CGCGCGATTG AGGCCAAGCA AGTAGCCGAG
CAAGATGCGC TGCGTGCTGC CCGTGAGCTT GAGCGGGCGC GGATCGAGGC CCAACAGCAA
GTAGCCCGTG CCGAGGCTGA AGCAAAGGCT CGGCTCGAAA TCGCCCGCGC CGAAGCCGAA
TCGCTCCGCT TGCTCGGTGA AGTGGTCTCG CCGCAATTGC TACAACTACG CTTCATCGAG
CGCTGGGATG GCATCTTGCC GCGCTTTGTC GGCGGCGATA ACGGGTTGTT GACAATGCTG
AGCATTCCGA CCGACGACAT TTTGGATGAT CCGGCGACCA CGCGCGCTAC ACCGCAAAAC
ATCGCGCCGG CAGGGACGGA AGCGACACCG AATCCGTAA
 
Protein sequence
MNQGRQSFPT PPMQGWSLSA LISLVFIIMV ASLLVSNSIT TIEAGTRGVL KTFGEITGVL 
DEGLHFRMPF ITSVTVVEVR TQRYESNSSA ASRDLQTVTT QVVINYRPDA TQVDRLVREI
GVDYERRVVD PAIQEAIKAA TARFTAEELI TRRPEVSDLI LSVLSERLMP RGVIVENVSI
TDFNFSPEFA RAIEAKQVAE QDALRAAREL ERARIEAQQQ VARAEAEAKA RLEIARAEAE
SLRLLGEVVS PQLLQLRFIE RWDGILPRFV GGDNGLLTML SIPTDDILDD PATTRATPQN
IAPAGTEATP NP