Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3553 |
Symbol | |
ID | 7266481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 4316578 |
End bp | 4317498 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643568360 |
Product | periplasmic solute binding protein |
Protein accession | YP_002464827 |
Protein GI | 219850394 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00157548 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGTAC AGTATCTCTG CATTATCGTC TTGCTTCTCA CCCTCACCGG TTGTAGTACA CCGGTAACAG ACGGTCGTCT GCGCGTCGTC GCAACTACCG GCCCGGTCGG TGATATTGTG CAAGTTATCG CCGGTGAACG GGTAGTCTTA CGCACACTCA TCGGCCCCGG CATCGATCCG CATACTTACG TTGCCACTGA GAGTGATCTA TTTGCCCTCC AAGAAGCCCA AATCGTGTTT TACAACGGTT TGCACCTTGA AGCTGGGTTA GACCGCATAT TCAAGGCGAT GAACCAAAGT GGACGCATTC CGGCAATTGC CGTGGCTGAA GCAATTCCTC CCCACCTCCT GCTGTATGCC GACGAGGGGA GAAACGCTTA CGATCCACAC GTCTGGCACG ATCCGCAACG TTGGAGCTAC GCTGTTCGGG CGGTGCGTGA TACCTTGATT GCCGTTGATC CGGGTGGTAG GGCCATCTAC CACCGGCGAA CTGAGCGCTA TTTGGCCGAT TTACAGTCAC TCGACGCTGA GTTACGGGCA ATGGCAGCGC GGATTCCACC TGAGCGACGT ATTCTGGTCA CGGCGCACGA TGCGTTTCAA TATTTTGGGC AAGCTTACGG GTTCCGCGTT GAAGCCGTTC AAGGGATCAG CACGGCTAGT GAAGCAAGTG CCACAGCGAT CAGGTCATTG ACCGAGCTGG TTGTGACGAA TCGTATTCCG GCGATATTTG TCGAGACGAG CGTTTCACCG CGCACAATTG AGGCAGTGCA GAGCGCAGCG CGTGCAGTTG GGTATGAAGT GCGTCTCGGC GGTGCGCTGT TCTCCGATTC ACTCGGTGAC CCTGATGGGC CGGCGGGGAC GTATGTTGGA ATGATGCGCC AGAATATGCA AACGATCGTC TCGGCGCTGA CCGATATGTA G
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Protein sequence | MPVQYLCIIV LLLTLTGCST PVTDGRLRVV ATTGPVGDIV QVIAGERVVL RTLIGPGIDP HTYVATESDL FALQEAQIVF YNGLHLEAGL DRIFKAMNQS GRIPAIAVAE AIPPHLLLYA DEGRNAYDPH VWHDPQRWSY AVRAVRDTLI AVDPGGRAIY HRRTERYLAD LQSLDAELRA MAARIPPERR ILVTAHDAFQ YFGQAYGFRV EAVQGISTAS EASATAIRSL TELVVTNRIP AIFVETSVSP RTIEAVQSAA RAVGYEVRLG GALFSDSLGD PDGPAGTYVG MMRQNMQTIV SALTDM
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