Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3550 |
Symbol | |
ID | 7266478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 4313956 |
End bp | 4315476 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643568357 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_002464824 |
Protein GI | 219850391 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2202] FOG: PAS/PAC domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00640923 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGACG ATACCGCATC TGTACCCTCT CCTTTTCTGA ACAGTGATGT CGTAGCTGCG CCTCTCAACA CGCTGCTAGA ATGTATCGTC GAAATAGTCA TCATTCTCGC ACCTGATCAG ACCATCCGCT TTGCCAGCCC AGCCCTGACC AACCTGCTCG GCCATCCGCA AGCCCTTGTG GTCAACCGAT CCCTCTATGA TTTCGTTCAC GTCGACGACC ACGACCGGTT GCAGCGCCAT CTCGCTCAAT TAGCCGATAG CCAATGCCGG CGCCAACCAA TCCGGGTACG TCTACAACAC GCCGAGGGCG GCTGGTACAT TTTCGAGCTG CGGTGCTGTA ACCGCCAGCA CCAACCCGAA GTCGGCGGGA TCATTCTCAG CGGCTATGAT GTCACGGCGT TGCTTGCCGC CGATTATGCG CTGCGCAACA ACGAATTTCG CTACCGCCAA CTGCTCGAAT TGGCCCCGCT GCTGATCATC ATCAGCAACC TTCCAGAGGG AATTATCCGC TACTGCAACC CAGCCGGCGC ACGCATCTTT GGCGTGGACG ATCCAGCCGA GCCGGTCAAC CAACCGCTGA CCGAATTTCT CTCTGGCGAA GATCACGACC TGATGCGCAA GCGCCGTCAG GCACTGCGCA ACGGCCAACT CCTCCAACCG GCCCGGTACC ACATTTATGC CCGCGATCAG ATTGTGCGCG TGATAGAGGT GCAAGGCACG TTGATCGAAG GCCCTGGCGA AATACAGGTC TTGACGATCG GTTACGATGT CACCGACCGG GTGGAAGCGG AACGGCAATT AAACTTGCGG GCGCGGGTGC TGTCGCAAAT TAACGAGGCG GTGATCGTGA CTGACCGCAG CGGCGCGATT ATCTATCTCA ACGAGATGGC GGCGTACCTC TACGCTGTTC AACCGGAAGC GATCATCGGC CAGCCGCTGA GCCGTCTGTT TACTGCTGAA CCGCTGCCGT ACCAGCCGGT GCAACCTTCG GTGCAGAGCT TCAGCACAGG TTGGCGCGGT GAATTAATCC ATCGCCTGCC AGACGGGCGG GCCATGATGG TGGAGGTTCG TATCGATCCG CTCTACCACG ACGAGTTAGC CAACGGCGAC GCGCTGATCG TGGTGCGCGA TATCACTGCG CGCAAACAGG CTGAAGAACG GTTGCGCCTG CTCGAATCGG TGGTGGTGCA TACCAACGAC GCCGTGATCA TCCTCGACGC TGAACCGCTG CATGCACCCG GCCCATTTAT TCGCTATGCC AACGCGGCCT GTAGCCAACT AACCGGCTAT GCCACCAATG AGCTGATTGG CCGTAGCTTG CGCATCTTGC ACGGCCCAGC TACCGATTCG GTGACACTCA ACCGGCTGTG GGAAACGATG GAGCGACAGC AGCCAGCTCG CTTTGCATTG CTCTACTACA CGCGCGCTGG CAAACCGATT TGGGTCGATC TCAGCTTGTC ACCAGTTACT GCCTTCCGTC TGATAGAGAA CAGGTCGAAC CAACACACAG CAAGAGGTTG A
|
Protein sequence | MIDDTASVPS PFLNSDVVAA PLNTLLECIV EIVIILAPDQ TIRFASPALT NLLGHPQALV VNRSLYDFVH VDDHDRLQRH LAQLADSQCR RQPIRVRLQH AEGGWYIFEL RCCNRQHQPE VGGIILSGYD VTALLAADYA LRNNEFRYRQ LLELAPLLII ISNLPEGIIR YCNPAGARIF GVDDPAEPVN QPLTEFLSGE DHDLMRKRRQ ALRNGQLLQP ARYHIYARDQ IVRVIEVQGT LIEGPGEIQV LTIGYDVTDR VEAERQLNLR ARVLSQINEA VIVTDRSGAI IYLNEMAAYL YAVQPEAIIG QPLSRLFTAE PLPYQPVQPS VQSFSTGWRG ELIHRLPDGR AMMVEVRIDP LYHDELANGD ALIVVRDITA RKQAEERLRL LESVVVHTND AVIILDAEPL HAPGPFIRYA NAACSQLTGY ATNELIGRSL RILHGPATDS VTLNRLWETM ERQQPARFAL LYYTRAGKPI WVDLSLSPVT AFRLIENRSN QHTARG
|
| |