| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3525 |
|---|
| Symbol | |
|---|
| ID | 7266453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 4290280 |
|---|
| End bp | 4291881 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643568333 |
|---|
| Product | Chloride channel core |
|---|
| Protein accession | YP_002464800 |
|---|
| Protein GI | 219850367 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0038] Chloride channel protein EriC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTTCCT CTCCTACGGT GAAGGAGCAG GTTACTGCCG GTGAGTTGGC CGAATTTCTC
GATTCGCGCC AGCAGCGGCG GCGTTTATTA CCCATTGCCA TTGGGGTTGG TGTTCTTGCC
GGGAGCATTA CCTTGCTGTT TCGCTGGCTC CTCAGCCTCG GTGATAGTTT GCGCACCGGG
CTGATCGAGT GGAGTTGGCA AGCGCCGATG GTAGGGTGGT TGCTCCCGAT TGTGTGGGCT
ATTACCGGTG CGACGTTGGC TGTCTGGCTG ACTCGTCGTT ATGCGCCGGA GGCATCGGGT
AGTGGGATTC CTCACATTGA GGCAGTGTTG TACCGCTTAC GCGATTTGCG TTGGCGACGA
ATTATTCCGG TCAAGATTAT CGGTGGTGTG TTGGCAATCG GTGGTGGTTT GGCGTTAGGA
CGGGAAGGGC CAAGTGTGCA AATCGGTGGT GCGCTGGGCG GCGGGATGGC CGAATTGTTG
CGCAGCGGTC CGCGTGAGCG CTTGACCCTT ATCGCAGCCG GTTCAGGGGC CGGCTTGGCG
GCGGCGTTTA ATGCACCACT GGCCGGTCTC GTGTTTGTGC TGGAAGAATT GCAGCGCGAC
TTTCGTCCGT CGGTGTTTGG TGCGGCTTTC GTGGCCGCAG TGGTGGCGAA TGTCATTACG
CGCTTATTTA CCGGGCAATT GCCGGTCTTT GCGATACCTG ATTATCCGAT CCAGCCGCTC
AGTACGTTGC CGGTGTTTAT TGTGCTGGGA ATAGTCTGTG GTGTAACCGG GGTCGTGTTC
AACAAGGTGC TGCTGGCGAT GCTTGAAGGG GTTGCTCAGC TCCGGCCACG CCAAAAACTC
GTCTATACGA TGCTAACCGG CTTGTGCGTT GGATTGGTTG GTTGGTGGTA TCCAACCCTG
ATCGGGGGTG GTCATCATTT TACCGAGGAT GTCTTGCGCG GTCAGATTGA TCTGACCCTG
TTGCCCATCC TCCTGGCGAT TCGGTTTGCG CTGACAATGC TGAGTTATGC GACCGGTGCG
CCGGGTGGTA TCTTTGCGCC GTTGCTGATT TTAGGTGCGC TCATCGGCTA CGGTGTCGGT
GAGACGACGC ATCGCATTGC ACCATTCTTA GCGCCACAGG CCGAAGTTTT TGGGGTGGTC
GGGATGGCAG CTCTGTTTAC CGGCATTGTG CGTGCTCCGC TCACCGGGAT CGTCCTCATC
GCGGAAATGA CCGGTAACTA CAATCAATTG CTCCCGTTGT TGTTGGCTTG TTTTTTTGCC
TATGCTGTAG CTGAAGTATT GCGCGATCGA CCGATCTACG AAGCACTCTT GCGCCGTGAT
CTGCGCCATA CGTCATCTGC CCACGTGTTG GAGGAGCCGG TCGTGGTTGA GCTGACGGTA
GCGCCAGAGG CGCCTTTCGT CGGGCGCACG ATTCGCGAAT TGGGCTTACC TCCCGGCTGC
ATTATTGTTC GTTGTCGAGA TGGAAATCGT GAATGGATTG CGACCGCCTA TACTCGAATC
GAGCCACATA TGCAGCTCAC CGTGTTGGTT GCGCCCGCGG CAGCCCATGG TTTAGCGATG
TTGCAAGCCG GTTGTGCAGC TCCTGACCGA GCAACGCATT GA
|
|---|
| Protein sequence | MSSSPTVKEQ VTAGELAEFL DSRQQRRRLL PIAIGVGVLA GSITLLFRWL LSLGDSLRTG
LIEWSWQAPM VGWLLPIVWA ITGATLAVWL TRRYAPEASG SGIPHIEAVL YRLRDLRWRR
IIPVKIIGGV LAIGGGLALG REGPSVQIGG ALGGGMAELL RSGPRERLTL IAAGSGAGLA
AAFNAPLAGL VFVLEELQRD FRPSVFGAAF VAAVVANVIT RLFTGQLPVF AIPDYPIQPL
STLPVFIVLG IVCGVTGVVF NKVLLAMLEG VAQLRPRQKL VYTMLTGLCV GLVGWWYPTL
IGGGHHFTED VLRGQIDLTL LPILLAIRFA LTMLSYATGA PGGIFAPLLI LGALIGYGVG
ETTHRIAPFL APQAEVFGVV GMAALFTGIV RAPLTGIVLI AEMTGNYNQL LPLLLACFFA
YAVAEVLRDR PIYEALLRRD LRHTSSAHVL EEPVVVELTV APEAPFVGRT IRELGLPPGC
IIVRCRDGNR EWIATAYTRI EPHMQLTVLV APAAAHGLAM LQAGCAAPDR ATH
|
|---|
| |