Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3502 |
Symbol | |
ID | 7266430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 4268352 |
End bp | 4269050 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643568310 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_002464777 |
Protein GI | 219850344 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGTAT TGATTGTTGA AGATGAACGT GCCATCGCCG GTTATATCAA ACGAGGTCTT GAAGAACAAG GGTATGCCGT CGATGTCGCT TATGATGGTC GGGAAGCACT TGACTGGCTG GATGCGGCGC CGTTTGATCT GGTGATCCTC GATTTGATGC TGCCTCAGAT CGATGGTCTC ACCGTCTGTC GTGAATTGCG CGCTCGTGGT TTTCGTATGC CCGTGCTAAT GCTAACAGCC CGCGATTCGA TTGACGACCG CGTGCGTGGT CTTGACAGTG GCGCTGATGA TTATCTGGTC AAACCGTTCG CGATCCAAGA GTTGTTAGCT CGTCTACGCG CGCTTGCGCG GCGGAGTACC GATGCGCCGA AAACGCCGGT GCTACACATT GCCGATCTGA TGCTTGATAC TGCTACCCGT CGTGTCAGTC GTGGCGGAAA GTACATTGAA TTGACCGCTA AAGAGTATGC CATACTTGAG TGTTTAATGC GAGCATCAGG CCGACTCCTG ACGCGGACAA TGATTGCCGA ACATGTTTGG AACTACGACA CATTTAATCA ATCGAATGTC ATCGATGTCT ATATTCGTAA TCTGCGTCGC AAAATTGACG ATCCCTTCCC GGTGAAACTC ATTCAGACGG TACGGGGGGC CGGATATCGG TTATGGTACG AAGCCGAGCA CGAGCATGAT CCAACGTAG
|
Protein sequence | MRVLIVEDER AIAGYIKRGL EEQGYAVDVA YDGREALDWL DAAPFDLVIL DLMLPQIDGL TVCRELRARG FRMPVLMLTA RDSIDDRVRG LDSGADDYLV KPFAIQELLA RLRALARRST DAPKTPVLHI ADLMLDTATR RVSRGGKYIE LTAKEYAILE CLMRASGRLL TRTMIAEHVW NYDTFNQSNV IDVYIRNLRR KIDDPFPVKL IQTVRGAGYR LWYEAEHEHD PT
|
| |