Gene Cagg_3467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3467 
Symbol 
ID7269692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4224587 
End bp4225318 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content55% 
IMG OID643568275 
Productbeta-lactamase domain protein 
Protein accessionYP_002464743 
Protein GI219850310 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.407477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTAACTT TAGGGCGAAA TGTCACGATT ACCCTCATCG GTCATGGTAC GTTTCATCTG 
ACCACACCGG AAGGTCGTAA TATTATGATC GATGCGTGGG TAGATGGCAA TCCGGCCTGC
CCCGAACCGT GGAAAGCGCG GGTGCGTGAG AAGCTAGCGG CAATCTTTGT GACGCACGGC
CATTTCGATC ATATCGGCGA TCTCGTCGAC ATAGCTCGTG AGACCGGAGC GACGGTTGTT
TGTCAATATG ATCTGGTCTC CTACCTTGAG GGCGAGGGTA TTCCGGCAGC GCAAATGGTT
GGGTTTAATA AAGGGGGGAC GGTGACGGTC GCCGATGTGC GGGCTACGAT GACGACGGCT
CACCATTCGA GTACGATCTA CGAGAATGGT CAGATTATCC CGCTCGGCAC GGCAGCCGGC
TATGTGTTAC GGTTTAGCAA TGGCTTTACG ATTTACCATA CCGGCGACAC CTGTGTGACT
ATGGATATGC AAATCATCGG TGAACTGTAC CGGCCCGATC TGGTCATTCT GCCGATCGGT
GATCACTTTA CAATGGATCC ACGGCAGGCG GCATACGCGC TGAAGCTGAT CGGGGCGAAG
TATGCGATCC CCGAACACTA CGGTACGTTC CCGATCCTCA CCGGCACGCC TGAGGCGTTG
GTTGAGTATT GTCGTGAGTT TGGCGTGACG ACTGAGGTGA TCACGCTCAA ACCGGGCGAA
TCGGTGAGCT AA
 
Protein sequence
MVTLGRNVTI TLIGHGTFHL TTPEGRNIMI DAWVDGNPAC PEPWKARVRE KLAAIFVTHG 
HFDHIGDLVD IARETGATVV CQYDLVSYLE GEGIPAAQMV GFNKGGTVTV ADVRATMTTA
HHSSTIYENG QIIPLGTAAG YVLRFSNGFT IYHTGDTCVT MDMQIIGELY RPDLVILPIG
DHFTMDPRQA AYALKLIGAK YAIPEHYGTF PILTGTPEAL VEYCREFGVT TEVITLKPGE
SVS