| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3417 |
|---|
| Symbol | |
|---|
| ID | 7269642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 4157249 |
|---|
| End bp | 4158886 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643568229 |
|---|
| Product | Amidohydrolase 3 |
|---|
| Protein accession | YP_002464697 |
|---|
| Protein GI | 219850264 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.151731 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTCG CCCGTGATCT TGCCCCTGAC CTTATTCTCT ATAACGCGGT AATCTATACG
CTCAACCCAG CGTTGCCGCG GTGCAGCGCG ATTGCCTGCA AAGATGGCCG GATTGTCGCG
GTAGGAGATG ACGCTGATGT TTTGGCTTTG GCCGGGCCGG CAACGCGCCG GATCGACCTC
GGCGGGCGGA CGGTCATCCC CGGCATTAAC GACGCGCACA ACCACATGCT TGAGATGGGC
TTGAAGCTAC GCCGGATCGG GCTTGACGAT TGCACATCGA TCGCTGAGAT GGTCGAGCGA
GTGCGAGCAG TGGCGGCGCA TACGCCTGCC GGCCAGTGGA TCGTCGGCGA AGGCTGGAAT
GAATCGCTCT TGCGCGAGAA TCGGTTGCCG AACCGTCACG ATCTCGATGC AGCGACTACG
ATCCACCCGG TCTTGCTTAA GCGATTTTTC AACATGGATG TGGTCAACAC GCGGGCGTTA
GAGTTAGCCG GTGTGACGGC AGCAACCCCT GATCCGGCAG GAGGGAAGAT CGAGCGAGCG
ACCGATGGTA CACCAACGGG GATTTTGCGT GCTGCTGCCA AAGAACTCTG TCGGCGGTTG
TTGCCAGTGC CAACGCAGGC CGAGTGTGTC GAGGCGCTTG AGGCTGCCGG CAGAGCCTAC
CTTTCCTATG GCATCACCAG CATCCTCGAC CCCGGCTTGC AACCGTGGGA GATCCAAGCG
TATCTGGCGG CGCGGCGGGC GGGTCGGTTG CCGGTGCGCG CCAATTTGCT GGTTTCGTGG
CATGGCTTCC GCGAGAGCGA AACGCGCGAC GAGTTAGAAG CGCGCGCAGC AGCGTTTGGT
GGTCTGAGTG GGTTGGGTGA CGAATGGTTG CGGATCGGTG CGCTGAAGAT GGCGATTGAC
GGCGGTACGA CTTCGCATAC AGCGTGGATG TTTCAACCAT TTGTCGGCGA AGATCGGGTG
TACGACTACA ACCGGCTCGA TCCCGAAGAG CTGGTTGAGT TTTTTACTCG TGGTCATACG
CTGGGCTGGG ACATCGGTAT TCACGCGATT GGTGACCGGG CGCATCACGA AGCGGCCCGC
GCTTTTGCCG AAGTGATCGC GGCCCATCCG CGCGAGCATC GCCATAATCT GATCCACGGC
TACTTCGCCA CCGAAGAGAG CTTGCAGCAC ATGGCGCAGC ATGGGTTAGC GGTTGTCATC
CAACCCACCT TCATCTACTA CGAGGGCGAC GATCTCTTCC GCGATGTCGG GCCTGAGCTG
GCGGCGCGCT ACAAACCAAT GCGCACGTAT CTCGACCGAG GTATTCGGGT GGTGGCAACG
AGTGATGTTC CGAGCACGGT GCATTTCAAC CCCTTTATCG GTCTGTATGC GCTGGTGACG
CGCAAGAGTT GGAAGGGGAC ACTCATCGCA CCTAATCAAG CGGTCAGCCG GGAAGAGGCG
CTGTATGCGT ACACGGTGGC CGGGGCCTGG CTCACACGCG AGGAGCATCT CAAAGGATCG
TTGGCACCGG GTATGCTGGC CGATATGGCG GTGCTCGACC GCGACTATTT TGCCTGTCCG
GCGGAGGAAA TAAAGGAGAT TCGGGTTGAG ATGACGATAC TCGGTGGGCA GGTTGTGTAC
GAGCGGAACG AGTCCTGA
|
|---|
| Protein sequence | MLLARDLAPD LILYNAVIYT LNPALPRCSA IACKDGRIVA VGDDADVLAL AGPATRRIDL
GGRTVIPGIN DAHNHMLEMG LKLRRIGLDD CTSIAEMVER VRAVAAHTPA GQWIVGEGWN
ESLLRENRLP NRHDLDAATT IHPVLLKRFF NMDVVNTRAL ELAGVTAATP DPAGGKIERA
TDGTPTGILR AAAKELCRRL LPVPTQAECV EALEAAGRAY LSYGITSILD PGLQPWEIQA
YLAARRAGRL PVRANLLVSW HGFRESETRD ELEARAAAFG GLSGLGDEWL RIGALKMAID
GGTTSHTAWM FQPFVGEDRV YDYNRLDPEE LVEFFTRGHT LGWDIGIHAI GDRAHHEAAR
AFAEVIAAHP REHRHNLIHG YFATEESLQH MAQHGLAVVI QPTFIYYEGD DLFRDVGPEL
AARYKPMRTY LDRGIRVVAT SDVPSTVHFN PFIGLYALVT RKSWKGTLIA PNQAVSREEA
LYAYTVAGAW LTREEHLKGS LAPGMLADMA VLDRDYFACP AEEIKEIRVE MTILGGQVVY
ERNES
|
|---|
| |