Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3310 |
Symbol | |
ID | 7267786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 4008533 |
End bp | 4010050 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643568123 |
Product | ABC transporter related |
Protein accession | YP_002464594 |
Protein GI | 219850161 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.156818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00192862 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAACGA CTCCCGTGCT GGAGATGCGC GATATTTCGC GACGGTTTGG TAACACGCAG GCATTGGCCG GTGTTAGTTT ACGGTTGTAT CCAGGCGAGG TGCATGCACT GTTGGGAGAA AATGGCGCCG GCAAATCGAC CTTAATCAAA ATTATGACCG GCGTTTATCA ACCAGACAGT GGTCAGATTC TGCTTGACGG TCGTCCGGTA CGAATCGGGA GTACGCTCGA AGCGCAGCGA TTGGGGATCG CGGCGATCTA TCAAGAGCCG TTGATGTACC CAGATCTAAA TGTAGCCGAG AATATCTTTA TTGCGCACGC CGGGCGTGGG CCGCTCGTGG ATTGGGGCAA GCTGTATCGT GAGGCAGAAG CAATTCTCGC CCAACTCGAT GTACATCTCG ATGTACGTCA GCCGGCGCGT GGGCTGAGTG TTGCTGCCCA ACAAACGGTT GAGATCGCGA AAGCGCTATC GTTACAGGTG CGTGTCTTGA TCATGGATGA GCCGACCGCG GCTCTTTCGG CGCATGAGGT TGAGCAATTG TTTACGATTG TACGCCGGTT GCGCGATCAA GGTGTTGCCA TTCTCTTCAT TTCCCACCGC TTAGAAGAAG TTTTCACCAT CGCCGACCGA ATTACGATCT TTCGTGATGG ACGACTGATT TCGTCCGCAC CGCGTACTGA CGTGACCGTA GCGCAGGCTA TCCGCGATAT GGCCGGGAGG AGTGTTGAGC AGCTCTTTCC CCGTCGTCAT ACCGTGCGCG ATGAAGTGTT GGTACAAGTG CGCGATTTGG GTCGTCAAGG CGTCTTTCAA GGTATCTCGT TTGATGTGCG GGCCGGTGAA GTACTCGGAT TTGCCGGTTT GGTCGGTGCG CGTCGGACCG ATGTTGGTTT GGCGCTATTC GGTATTGCTC CGGCCGATCA GGGTACGGTA ACGATTGCCG GCCAGCCGGT ACGTATCACG AATCCGCGGC AAGCGATGCG TTACGGTATT GCCTATGTAA GCGAGGATCG GCGCGGTTTG GGCTTATCGC TCCCTATGTC GATTGCGGCT AATATCACCC TACCCACGCT CGGTCGGTAT CTAAACCCGT TGGGCTTGCT GCGCCGTCAG GCTGAATTGG CTACTGCCGA AGAGTTTCGT CGGCGCCTGG CGATCCGAGC ACCGTCGGTT GAGGTAGAGG TGGGTAAGCT GTCGGGGGGT AATCAGCAGA AGGTCATGCT GAGCAAGTGG CTCAATACCC GTCCACGTTT GCTTATTCTC GACGAGCCGA CACGCGGGAT TGATGTTGGT GCGAAGGCTG AAGTTCACCA AATGATCGAT GATTTGGCCG CTGAAGGAAT TGCGATCATT CTCATCTCTT CCGATCTGCC GGAAGTGTTG GCAATGAGTG ATCGAGTGTT GGTGATGCGA GAAGGTCGCC AGATGGGTAT CTTTTCGCGC CACGAGGCAA CGCAAGAACG GGTGTTGGCG GTAGCAATGG GTCAAGAAGC GCACAATGCG ACAGGAGCGA TGTCATGA
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Protein sequence | MQTTPVLEMR DISRRFGNTQ ALAGVSLRLY PGEVHALLGE NGAGKSTLIK IMTGVYQPDS GQILLDGRPV RIGSTLEAQR LGIAAIYQEP LMYPDLNVAE NIFIAHAGRG PLVDWGKLYR EAEAILAQLD VHLDVRQPAR GLSVAAQQTV EIAKALSLQV RVLIMDEPTA ALSAHEVEQL FTIVRRLRDQ GVAILFISHR LEEVFTIADR ITIFRDGRLI SSAPRTDVTV AQAIRDMAGR SVEQLFPRRH TVRDEVLVQV RDLGRQGVFQ GISFDVRAGE VLGFAGLVGA RRTDVGLALF GIAPADQGTV TIAGQPVRIT NPRQAMRYGI AYVSEDRRGL GLSLPMSIAA NITLPTLGRY LNPLGLLRRQ AELATAEEFR RRLAIRAPSV EVEVGKLSGG NQQKVMLSKW LNTRPRLLIL DEPTRGIDVG AKAEVHQMID DLAAEGIAII LISSDLPEVL AMSDRVLVMR EGRQMGIFSR HEATQERVLA VAMGQEAHNA TGAMS
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