Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3286 |
Symbol | |
ID | 7267760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 3983272 |
End bp | 3983916 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643568102 |
Product | protein of unknown function DUF1568 |
Protein accession | YP_002464575 |
Protein GI | 219850142 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00118326 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000135739 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCTGCTT TTTACCGCCG CAATCTGCCG CACATCCATC CCAGCCATGC GGCCTTCTTC ATCACCTTTC GGCTGGCGGG TTCGCTGCCG CCGGAGGTCA TTGAACGCTT GCGGGAGGAA TTCCAGGCAG AGGAACGGCG GTTGCAACAA ACCCTGAGCG GCGCGGCACT GCTGAGCGAA CGGTACAAAA TCCAAAAGAA ATTCTTTGGA CGCTACGATG CATGGCTGGA TCAAATGGCG CACGGCCCGA CCTGGCTGCG TCAGCCGGAA ATTGCCCAAC TCGTTGCGGA CGAGATTCGG CGTCTGGATG GCGCGCACTA TGACCTGTGG GCCTATTGCA TCATGCCCAA CCACGTTCAC CTGCTAGTGA ATATGGCACG TTTTGGTGAC GTTGATACCA GAGGGCATCC TTCCGCACTG AGCCGGGCCT TGCATCTACT CAAAGGACGC ACGGCGCGCT ACGCCAACCG CTTGCTGGGG CGAAGTGGAA AATTTTGGCA GGACGAAAGT TACGATCACG TCGTTCGTGA TGAGGCGGAA TTGCAACGCA TTCTCCAGTA CATCGTCAAC AATCCCGTTA AGGCAGGTCT TGTTGCCGAT TGGCAAGACT GGCCCTATAC GTTTGTAGCC GTAGCACAGG ATTAA
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Protein sequence | MAAFYRRNLP HIHPSHAAFF ITFRLAGSLP PEVIERLREE FQAEERRLQQ TLSGAALLSE RYKIQKKFFG RYDAWLDQMA HGPTWLRQPE IAQLVADEIR RLDGAHYDLW AYCIMPNHVH LLVNMARFGD VDTRGHPSAL SRALHLLKGR TARYANRLLG RSGKFWQDES YDHVVRDEAE LQRILQYIVN NPVKAGLVAD WQDWPYTFVA VAQD
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