Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3220 |
Symbol | |
ID | 7267367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 3904641 |
End bp | 3905348 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643568041 |
Product | ABC transporter related |
Protein accession | YP_002464514 |
Protein GI | 219850081 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000135458 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0828287 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATAC TTGACAAAAC TGTCATCCGG TGTGATCGGG TTACGAAAAC CTATACCGAG GGCGATGTGC AGCGCACGGT ACTGCACGAC ATCACGATCA CGGTCACTGC CGGTGAGTTC GTTGTGTTGC TCGGCAAGAG TGGTAGTGGG AAAAGCACCC TGCTGAATCT GGTGAGCGGG ATCGATACCC CCACATCGGG GACGATCTGG GTGGCCGGTC AGCGGCTCGA TCAGCTTAGT GAACGTGAAC GAACGCTGTT TCGCCGTCGT TCCATCGGGT TTGTGTTTCA ATTCTACAAC CTTGCCCCCA CGCTGACGGC ATTGGAAAAT GTTCTGTTAC CGCTGGAGTT GAACGGTCAA CGCGGTGTGG CAGCGCGGTC GGCAGCTTTA GCCATGCTCG ATGCGGTCGG ATTGGCCAAT CGCGCTCATA CCTACCCCGA CCGTCTGAGC GGTGGCGAAC AGCAGCGGGT GGCAATCGCG CGGGCGCTGG TACATAATCC CGATCTTGTG TTAGCCGATG AACCGACCGG CAATCTGGAT AGCGACACAG GTGCGCAAGT GCTCGATCTG CTCGATAGGC TTACTCGTCA GGTGGGTAAA ACTCTCGTGA TGGTGACCCA TAGTCGTGAG ATGATCGGGG TCGCCGACCG GGTCTTGCAA TTACGCAATG GTCGAATGTT TGAAGAGGCT TCATTGCCAA TACAATGA
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Protein sequence | MQILDKTVIR CDRVTKTYTE GDVQRTVLHD ITITVTAGEF VVLLGKSGSG KSTLLNLVSG IDTPTSGTIW VAGQRLDQLS ERERTLFRRR SIGFVFQFYN LAPTLTALEN VLLPLELNGQ RGVAARSAAL AMLDAVGLAN RAHTYPDRLS GGEQQRVAIA RALVHNPDLV LADEPTGNLD SDTGAQVLDL LDRLTRQVGK TLVMVTHSRE MIGVADRVLQ LRNGRMFEEA SLPIQ
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