Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3156 |
Symbol | |
ID | 7269905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 3836479 |
End bp | 3837474 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643567977 |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_002464450 |
Protein GI | 219850017 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTATCG GTCTTTCCGC TTTAAGTTTT AGCTATCGCT GTGGCCTGAT CGGGCGTGGG ACGGTGCGTG CCGTTAGTCA TCCACTTGGT GTCGAGGATA TCATCACACT GGCAACCCGC GCTGGCCTGC AAAGTATTGA GTTTCCGCTC GGTATACTAC CCGATCTGTC GCCCAACCGG CTTAGTACAC TCCGCGAGCG GTGCAATCGC TGTGGTCTCA CACCGGTTGC CGATAGCGAG ATTGTCGACA TCGATCTGCT AAAGGCTCAT ATTCCGGCAG CGGCGATGCT CGGCGCCCGC GTACTGCGTG TCCTGATCAG CCCGGTACTT GAAGGGTATC GTCGTCCTTT CACCGACAAC TGGCCGGCCC ATTTGGCCGA TGTCACGGCC CGTCTGCGCG CAGTGATCGA TCTGGCCGCC GAACATAACA TCGTGTTGGC GGTTGAGAAC CACCAAGACG CCACTAGTGC CGATCTTGCT GCGATCTGCA CCGCAGTCGA TAGCCCATTC ATCGGTGTCT GCTTCGATGC GGTTAACTGC CTTGTTGTCG GTGAAACACC GTATGCGGCG TTTGAACGGC TCGGCCCACT GATTCGTAAT GTACATCTGG CCGATTATGA AACGTACCCC ACCACCCAAG GTTGGCGACT CGTGCGTTGT GCGCTCGGCG AGGGCGATTT GGATATTCGT CGCCTGTTTG GACTGATCGA GCAGTATGCG CCTGATGTCG CGTGTCAGAT TGAGCTGGTC AGTCATAGTG CTCGTCACGT GCGTATTCTC GATGATGACT GGTGGCAAGG GTACCCTCCC TGCGATGTGC GTGAGGTGCT GCCGGTCTTG CGGCTGTTTG CCCAAACGAT GCGCCTCCGT GACGATGACT GGCGCACGCC ATGGGAACGC GGTTCCGGTG AAGAGCAGAT CAGCTTGTAC GAAGATCAAC AGTACGCAAC TTCAATCGCC TACCTGCGCA CCATTGGGGT CTTACCTCGC TTCTGA
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Protein sequence | MFIGLSALSF SYRCGLIGRG TVRAVSHPLG VEDIITLATR AGLQSIEFPL GILPDLSPNR LSTLRERCNR CGLTPVADSE IVDIDLLKAH IPAAAMLGAR VLRVLISPVL EGYRRPFTDN WPAHLADVTA RLRAVIDLAA EHNIVLAVEN HQDATSADLA AICTAVDSPF IGVCFDAVNC LVVGETPYAA FERLGPLIRN VHLADYETYP TTQGWRLVRC ALGEGDLDIR RLFGLIEQYA PDVACQIELV SHSARHVRIL DDDWWQGYPP CDVREVLPVL RLFAQTMRLR DDDWRTPWER GSGEEQISLY EDQQYATSIA YLRTIGVLPR F
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