| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3009 |
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| Symbol | rplF |
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| ID | 7266540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 3673580 |
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| End bp | 3674143 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643567831 |
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| Product | 50S ribosomal protein L6 |
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| Protein accession | YP_002464305 |
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| Protein GI | 219849872 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.149447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00994922 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCGCGAA TTGGAAAACG ACCGATTACC GTGCCGAAGG GCGTACAGGT GACCATCGGT
GAGCAAAACC TCGTCACCGT CAAGGGGCCA AAGGGAACGC TTACCCAAAA GTTGCATCCT
GATATGATTA TCAAGCAGGA AGGTGATGTT ATCACCGTGC AACGCCCTTC GGACGAGAAG
CTGCATCGCT CCCTGCACGG CCTGACCCGC ACGCTGATCA ATAACATGAT TGTCGGCGTG
ACGCAGGGGT GGCAGCGAGC GCTGGAGATT AACGGCGTCG GTTATCGCGC TCAGCTCGAA
GGCAAGACCC TGGTGCTGAA CCTTGGGTTT TCGCATCCGG TTCGGATTGA ACCACCACCG
AACATTAGTT ACATCGTTGG TGAACGCAAA TCGGCCAACG ATCCGCTGTC GCTGACGGTG
GTCGGTATCG ACAAACAGCA GGTTGGTGAA GAGGCAGCGC GTATCCGCAG CTTACGTCCG
CCAGAGCCGT ACAAAGGCAA AGGCATTAAG TATCTGGAAG AGAAGATTCG CCGCAAGGCC
GGTAAGGCCG GTAAGGCGAA GTAG
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| Protein sequence | MSRIGKRPIT VPKGVQVTIG EQNLVTVKGP KGTLTQKLHP DMIIKQEGDV ITVQRPSDEK
LHRSLHGLTR TLINNMIVGV TQGWQRALEI NGVGYRAQLE GKTLVLNLGF SHPVRIEPPP
NISYIVGERK SANDPLSLTV VGIDKQQVGE EAARIRSLRP PEPYKGKGIK YLEEKIRRKA
GKAGKAK
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