| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2920 |
|---|
| Symbol | |
|---|
| ID | 7268792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 3583953 |
|---|
| End bp | 3585062 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643567741 |
|---|
| Product | Na+/Ca+ antiporter, CaCA family |
|---|
| Protein accession | YP_002464216 |
|---|
| Protein GI | 219849783 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0530] Ca2+/Na+ antiporter |
|---|
| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00779404 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.479363 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGTA CGGTACTGGC GTTATTAATT GGTGGCTTGA TCTTTCTCAG TATTGGTGGT
GAGTTGTTGG TGCGCGGTGC GAGCCGATTG GCGATGTTGG CCGGTATTTC GCCACTGGTA
GTCGGCTTAA CGGTCGTGTC GTTTGGGACG AGTTCGCCTG AGCTGGCTGT GAGTATTCAA
GCCGGTTTAG CCGGTAAGAG CGATATTGCG GTAGGGAATG TAGTTGGCAG TAATATTTTC
AATATTCTCT TTATTCTGGG TGCTTGTGCG CTAATTAGTC CGTTGATCGT CGCTGTGCAG
CTCATCCGGC GAGAAGTGCC GTTGATGATA GGCATTTCCC TCCTTTTTGC CGGGCTAGCG
CTCGATGGTG TCATACATTG GCTCGATGGC TTCCTTTTGT TTAGTCTGTT GGTGATCTAT
ACCATCTGGG CGATCTATGC TAGCCGTAAA GAGGGTATGG CTGCTCAGGC CGAGTTTGCC
CAAGAGTTTG GTCCGCACAC GTTACCAGAG CAACGAACTC CGCGCGTGTG GTTTGTCAAC
CTCGGTTTTA TCGTCGGTGG ACTGCTGTGC TTGAGCCTCG GCTCAAACTG GCTGGTCGAC
AGTGCGACGG CGCTCGTCCG TGCCTTCGGG GTGAGTGATG TGGTTATCGG TCTGACCATT
GTGGCCGCCG GCACGTCATT GCCCGAAGTG GTCGCATCAA TTGTCGCCAC GCTGAAACGA
GAACGTGATA TTGCAATCGG CAATGTCATT GGCAGTAATA TCTTCAATAT TCTCGGCATT
CTTGGGGTGG CGGCCCTGGT GACCCCCGGT GGATTACAGG TAGCGCCGGC AGTGAACACC
TTCGATCTCC CAGTGATGAT TGCGGTCGCT TTCGCTACAC TGCCTATCTT CATCACCGGT
CTCAGTATTA ATCGCTGGGA AGGTGTGCTC TTTTTAGGCT ACTACATCGC CTATACGATA
TATCTGCTCT TGTCGGCAAC TCAGCACGAT GCACTGCCGG TGTTTAGCAG TGTGATGGTG
TCGTTTGTCT TGCCGATCAC GGCGGTAACG CTCGCCATTC TAACCTTCCA CGCCATTCGT
CGCCGTGATT GGCAGAAGGT GCAATCGTAA
|
|---|
| Protein sequence | MTGTVLALLI GGLIFLSIGG ELLVRGASRL AMLAGISPLV VGLTVVSFGT SSPELAVSIQ
AGLAGKSDIA VGNVVGSNIF NILFILGACA LISPLIVAVQ LIRREVPLMI GISLLFAGLA
LDGVIHWLDG FLLFSLLVIY TIWAIYASRK EGMAAQAEFA QEFGPHTLPE QRTPRVWFVN
LGFIVGGLLC LSLGSNWLVD SATALVRAFG VSDVVIGLTI VAAGTSLPEV VASIVATLKR
ERDIAIGNVI GSNIFNILGI LGVAALVTPG GLQVAPAVNT FDLPVMIAVA FATLPIFITG
LSINRWEGVL FLGYYIAYTI YLLLSATQHD ALPVFSSVMV SFVLPITAVT LAILTFHAIR
RRDWQKVQS
|
|---|
| |