Gene Cagg_2872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2872 
Symbol 
ID7267580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3527134 
End bp3529284 
Gene Length2151 bp 
Protein Length716 aa 
Translation table11 
GC content55% 
IMG OID643567695 
Productalpha-glucan phosphorylase 
Protein accessionYP_002464170 
Protein GI219849737 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0058] Glucan phosphorylase 
TIGRFAM ID[TIGR02094] alpha-glucan phosphorylases 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGGT TTGAACACGA GATTCTGTTC ACTCCATGTC CCGAACGGAT TGCTCGGCTT 
CGTGAACTTG CCTACAACCT TTGGTGGACG TGGCATCCCG AAGCGCAAGA CCTTTATCGT
TCTATCGACC CAGAGCTGTG GGAGCTGGTG TATCACAACC CAGTTGAGTT CTTGCGCGAT
GTACGTCAGC GCAAACTTGA GGCTGCTGCC AACGATCCGG CCTATCTGAA GCGGTACGAT
GCGGTACTCA AGAGCTTCGA CAGCTACATG CGGTCTGAAA AGACGTGGTT CAGAAAGAAT
TATCCCGATG CGAAAGACAC GTTGATCGCA TATTTTAGTG CCGAGTTTGG CCTCCACGAA
AGCCTACCAA TCTACTCAGG CGGTTTGGGC ATCTTGTCGG GCGATCACAT CAAAGAGGCT
AGCGATATGG GCATCCCACT GGTCGGCGTT GGCTTTATCT ACCCGCAGGG CTACTTCCGG
CAACGCATCG ACCCTAGTGG TTGGCAGCAC GCCGAGTACA ACAAGCTCAA TTTTGCCGAT
GTACCGGCGC TACCGGCGCT CGATCCCGAC GGACGTGAGG TGGTGATCGA GGTGGAATTA
CCCGGTCGCA CGATCTACGC CAAGGTCTAC AAGTTTCAAG TTGGTCGGGT TGAGCTGTTG
TTGATGGATA CCGACATCCA CCCGAACAGT CCACAAGATC GCGAATTATC GGCGCGGCTC
TACGGTGGCG ACCAAGAGAT GCGTATTTCG CAAGAGTTGG TGCTTGGTGT AGGTGGTGTG
CGGGCGCTGC GTCGTCTCGG TTATAAACCG ACGGTCTGGC ATATGAATGA AGGGCACTCC
GCCTTCCTTG TGCTCGAACT GTGTCGCGAA TTGGTGGCGC AGGGGTACAG TTTTGACGAG
GCGATGGAGC AGGTCAAGGC GCATTGTGTG TTCACGACCC ACACCCCGGT CCCCGCCGGT
AATGATGCCT TCCCGCTGCC GATGATCGAG AAGTTCTTCT GGAGTTTCTG GCCGCAACTC
AACCTCACCC GCGATGAGTT TATGAATCTG GCTTTGCAAG AGCAGCAATG GGGATCGACC
TTTGCAATGA CGGCGCTGGC ACTGCGCTTT TCAGCTTATC GCAATGGGGT GAGCAAATTG
CACGGTCATG TGGCACGCGG CATGTGGCAG TGGCTCTATC CCGGTCGTTC GCAAGATGAG
GTGCCGATTA CCTCGATTAC CAACGGTGTG CATACGGCAA CGTGGCTGGC GCCGGAGATG
CGTACACTCT ATACCTCGTA TTTGGGCAAG AACTGGGAAG AAAACCTCGA TGATCCGCAT
ATGTGGCGGA AGGTATACCA GATTCCCGAT GAGACTTTCT GGCGGACCCA TCAAAAACTG
AAGAGTGATC TGATCGCGTT CAGTCGCCAG CGTCTCCAAC AGCACTACAT CCGCTTGGGC
ATTCCGGCGC CGGTTTGGCC GGTGTTGGAA GAGGATATTT TGACGATCGG CTTTGCCCGT
CGGTTTGCGA CCTACAAGCG GGCGACATTG CTGTTTAAAG ATATTGAGCG ACTGAAATAC
ATCTTGAACC GGCCCGGTAA GCCGATTCAG ATTATCTTTG CCGGAAAAGC GCATCCTAAG
GATGATCCGG GCAAACAGTT TATCCAAGAG GTCTATCGTC TCTCGATGCA GCCGGGGCTG
GCCGGGCGGA TAGTGTTCCT CGAAGAATAC GATATTGCGG TGGGGCGAGC ACTGGTGCAA
GGTGTCGATG TCTGGCTCAA CAACCCGCGT CGCCCTTACG AGGCGAGTGG CACAAGTGGG
ATGAAGGCCA GTCTCAACGG TGCGCCTAAC TGTTCGGTAC TCGATGGCTG GTGGCCAGAA
GCGTACAATG GGCGCAACGG TTGGGCTATC GGTGATGAGC GTGAGTATGC GAACCAAGAC
GAGCAGGACT GGAACGATGC GCAATCGCTC TACCATCTGC TCGAACACGA GATTGCACCC
CGCTTCTACG ATCAGCGCGA TGCCAATGGG ATTCCGGTAG AGTGGATTCA GATTTGCAAG
GAGGCAATTG CGACAGTAGC ACCAATCTTT AGCACGCGCC GGATGTTGGC CGAATATCTG
CGCGAGATGT ATATGCCGGT GGCAGTGCAA GGTGCAATGC CGCAAGCCTA G
 
Protein sequence
MLRFEHEILF TPCPERIARL RELAYNLWWT WHPEAQDLYR SIDPELWELV YHNPVEFLRD 
VRQRKLEAAA NDPAYLKRYD AVLKSFDSYM RSEKTWFRKN YPDAKDTLIA YFSAEFGLHE
SLPIYSGGLG ILSGDHIKEA SDMGIPLVGV GFIYPQGYFR QRIDPSGWQH AEYNKLNFAD
VPALPALDPD GREVVIEVEL PGRTIYAKVY KFQVGRVELL LMDTDIHPNS PQDRELSARL
YGGDQEMRIS QELVLGVGGV RALRRLGYKP TVWHMNEGHS AFLVLELCRE LVAQGYSFDE
AMEQVKAHCV FTTHTPVPAG NDAFPLPMIE KFFWSFWPQL NLTRDEFMNL ALQEQQWGST
FAMTALALRF SAYRNGVSKL HGHVARGMWQ WLYPGRSQDE VPITSITNGV HTATWLAPEM
RTLYTSYLGK NWEENLDDPH MWRKVYQIPD ETFWRTHQKL KSDLIAFSRQ RLQQHYIRLG
IPAPVWPVLE EDILTIGFAR RFATYKRATL LFKDIERLKY ILNRPGKPIQ IIFAGKAHPK
DDPGKQFIQE VYRLSMQPGL AGRIVFLEEY DIAVGRALVQ GVDVWLNNPR RPYEASGTSG
MKASLNGAPN CSVLDGWWPE AYNGRNGWAI GDEREYANQD EQDWNDAQSL YHLLEHEIAP
RFYDQRDANG IPVEWIQICK EAIATVAPIF STRRMLAEYL REMYMPVAVQ GAMPQA