Gene Cagg_2849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2849 
Symbol 
ID7267555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3499369 
End bp3500757 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content60% 
IMG OID643567670 
ProductUDP-N-acetylmuramoylalanine/D-glutamate ligase 
Protein accessionYP_002464147 
Protein GI219849714 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase 
TIGRFAM ID[TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTG GAGCACGAGT ACTGGTCATG GGGTTAGGCG TGCATGGCGG TGGGTTGGGG 
GTCGCTCGTT GGCTGTTACG CCGAGGAGCT GAGGTAACGG TGACCGACCT CGCTTCGCCT
GAGGCGCTGG CTGACTCGAT TGCCCGCCTT GACGCTTTTG CCGCCGAATT GGGGAAACAG
GTGCGGTATA CGCTGGGTGA GCATCGGGCT GAAGACGTGT GTTCTGCCGA TATGCTGGTA
GTGAATCCGG CGGTACGCCC CGATTCGCCG TGGCTGGCAC TGGCACGTTC GTGCGGCATC
CCCATTGAAA CAGAAATGAC CCTCTTTTTT CGTGCATGTC CGGGTCCTAT CCTCGGTGTG
ACCGGTACCA AAGGTAAGAC GACCACTACT CTCCTGTTAG CCGAGATGAT CCGACAACGC
TACCCCGACA CTGTTGTCGC CGGCAATTTA CGGGTTTCGG CGCTTGAGTT GCTCGATCAG
ATCGGGCCTC AGACGCCGGT GGTGCTGGAA CTGAGCAGCT TTCAGCTCGA ACGGCTCGGT
GAGGCACGAT GTAGTCCATC GTATGCACTG CTGACGAATG TGGGTGTCGA TCATCTCAAT
TGGCACGGTT CGTTAGCTGC CTACGTCAAT GCCAAGCGGC AGATTATGGC TCATCAGGGG
CCGGACGGGG TGGCAGTACT GCCGTTGGCA CAGGCACAGG AGTGGGGACA GGGGCGACCG
GGAGTGATCA GCTATAGTCT CACCGACCCG ACTGCTGATG CGACGATGAC CGACGATGGC
GTGTTGCGCT ATCGCGATGT CGAGTTGTTC CATCGCTCCG ATCTACGGTT ACCCGGCGAT
CATAATGCGG CGAACGCCTT AGCTGCCGCC GTGCTCGCCT ACCGGTTTGG GATCGATCCG
GCAGCAATTG TAGCCGCACT GCACCGGGTG ACCGGCGTTG AACATCGGCT CGAGCTGGTA
ACGATTATCG ATGGTGTGCG CTACATTAAC GACACGACTG CTACCAACCC TGCGGCCACA
GCCGCTGCAT TAGCGACGGT AACAGGTCCG GTGGTACTCA TCGCCGGCGG GGCTGACAAA
GACCTCGACC TGCCGGCGTT GGCGGCCACG ATTGCCGAAC GTGTAGCAGC AGTTGTGCTG
TTGGACGGCA GTGCCACACC GCGCTTACAA GCCTTGCTGC GGTCGTACAA GCCGACGTTA
CCGGTCCACG GGCCGTTTGA TAATCTAAGC ACAGCCGTAC AGACAGCACG TGGGTTGGCA
CAAGCCGGTG GTGCAGTGTT ACTTTCGCCC GGATGCGCGA GTTTCGGAAT GTTTCGGAAC
GAATTTCATC GTGGTGAAGC GTTTCGCCGT ATCGTGCGCG ACTTGGCCGC CGCTCACGCC
GGGGAGTAG
 
Protein sequence
MKVGARVLVM GLGVHGGGLG VARWLLRRGA EVTVTDLASP EALADSIARL DAFAAELGKQ 
VRYTLGEHRA EDVCSADMLV VNPAVRPDSP WLALARSCGI PIETEMTLFF RACPGPILGV
TGTKGKTTTT LLLAEMIRQR YPDTVVAGNL RVSALELLDQ IGPQTPVVLE LSSFQLERLG
EARCSPSYAL LTNVGVDHLN WHGSLAAYVN AKRQIMAHQG PDGVAVLPLA QAQEWGQGRP
GVISYSLTDP TADATMTDDG VLRYRDVELF HRSDLRLPGD HNAANALAAA VLAYRFGIDP
AAIVAALHRV TGVEHRLELV TIIDGVRYIN DTTATNPAAT AAALATVTGP VVLIAGGADK
DLDLPALAAT IAERVAAVVL LDGSATPRLQ ALLRSYKPTL PVHGPFDNLS TAVQTARGLA
QAGGAVLLSP GCASFGMFRN EFHRGEAFRR IVRDLAAAHA GE