| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2847 |
|---|
| Symbol | |
|---|
| ID | 7267553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 3496733 |
|---|
| End bp | 3498196 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643567668 |
|---|
| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase |
|---|
| Protein accession | YP_002464145 |
|---|
| Protein GI | 219849712 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
|---|
| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATCAGGC TCGACAACTT ATTGTACGCA GTACAACCAC GTGCGACGCG GCAAGTGGTT
CATATACCAC CGTCGTGGGT CGACCGGCAG ATCGGTCCGG TCGTCGTCGA TTCGCGCGAG
GTGACGCCGG GATCGCTCTT TGTGGCGCTA ACCGGCGAAC GTACCGATGG ACATTTATAT
TTACCCGATG TTGTGGAACG CGGTGCGGCC GCTGCACTCG TTTCGCCGGC GAAATTGGCG
GCATTGGCGC CGGATTGGTC GGCGGTGGCT CGGCCATGGC GGCTGATCGA GCCGAGTGAC
GGTAGCGCAT TGGCGACTGT GCCGCCGGAA GCGTGCCTCT TCATCGCTGT AGACGACCCG
CTCTGTGCAT TGCAGCGCGC GGCTGTCTAC CATCGGCGGA TGTTCACGCC AACGGTGATC
GGTATTACCG GTAGCGTGGG CAAGACCTCG ACGAAAGAGG TCGTCGCGGC TGTGATAAGC
CAGCGGCTAC GTACCTTAAA AAGCCAACGG AGCTTTAATA GCGATATAAC ATTGCCGGCT
ACTTTGCTCG GGTTGACTGC CGACCATCAA GTCGCAGTGC TCGAGATGGG GATGTGGGCG
GCGGGCGAGA TCCGTTTTCT GGCGGCATTA GCCCGCCCTC ACATCGGGAT TGTGACGAAT
GTTGGCCCGT CGCATTTGGA GCGATTGGGC AGTATCGAGG CGATTGCCAA CGCCAAGGCT
GAATTGCCCG AATCGCTTCC ACCCGATGGC TGGTGTATCC TCAATGCCGA TGACCCGCGC
GTCGCGGCGA TGGCTAAGCG CACGCCGGCG CATGTGGTTA CCTACGGCTT TGCACCGCAC
GCCGATGTGC GTGCGGTGGA GGTTATCAGC CATGGCTTAT ATGGGATCGA GCTGACCGTT
TCGTACCAGG GTGAGCAGCA CCATCTACAG ACGCCACTGA TTGGTCGTCA CCATGCCTAC
ACCACGTTGG CTGCAATTGC CGCCGCATTG GTGGTAGGGC TAGACTGGGA AGCGATTGCT
GCCGGTTTGC GCGATCCTGG TGAACGGTTG CGCTTGCGGG TTGTGAACGG GCAGCAAGGG
GTGACGATCA TCGATGATAC TTACAACGCC GCGCCGCTTT CAACCATTGC TGCCCTCGAG
GTGTTAGCTG AGACACCCGG TCGCCGGATT GCCGTTTTGG GTGAAATGCT GGAGTTGGGT
TCGGCTACCG AAGAGGGACA CCGACAGGTC GGTGCGGCGG CGGCGCGAAC GGCCGATCTG
TTGGTGGCGG TTGGGCGCCA AGCCCAGACG GTAGCTGCCG CAGCACGGGC AGCCGGTATG
GCGGAGGCGC AGGTTATCGT GTGTGCCGAT AACGATGCAG CGATAGACCG ATTGCGCTCG
CTTATCCAAG CCGGTGATTG CCTGCTTGTT AAGGGTTCGC GCGGGGTGCA GATGGAGACC
ATCGTCACTG CACTGCAAGG TTAG
|
|---|
| Protein sequence | MIRLDNLLYA VQPRATRQVV HIPPSWVDRQ IGPVVVDSRE VTPGSLFVAL TGERTDGHLY
LPDVVERGAA AALVSPAKLA ALAPDWSAVA RPWRLIEPSD GSALATVPPE ACLFIAVDDP
LCALQRAAVY HRRMFTPTVI GITGSVGKTS TKEVVAAVIS QRLRTLKSQR SFNSDITLPA
TLLGLTADHQ VAVLEMGMWA AGEIRFLAAL ARPHIGIVTN VGPSHLERLG SIEAIANAKA
ELPESLPPDG WCILNADDPR VAAMAKRTPA HVVTYGFAPH ADVRAVEVIS HGLYGIELTV
SYQGEQHHLQ TPLIGRHHAY TTLAAIAAAL VVGLDWEAIA AGLRDPGERL RLRVVNGQQG
VTIIDDTYNA APLSTIAALE VLAETPGRRI AVLGEMLELG SATEEGHRQV GAAAARTADL
LVAVGRQAQT VAAAARAAGM AEAQVIVCAD NDAAIDRLRS LIQAGDCLLV KGSRGVQMET
IVTALQG
|
|---|
| |