Gene Cagg_2804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2804 
Symbol 
ID7267509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3442760 
End bp3443410 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content54% 
IMG OID643567625 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_002464103 
Protein GI219849670 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.995251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.311692 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCA TTCTGTTGGT CGATGACCAA ACGTTGGTGC GGCAGGGCAT TCAGACACTG 
CTCGATCTGG AAGAGGATTT AACGGTTGTA GGGGCAGCGG CGAATGGTCA ACAGGCATTG
GAGTTGGCTG AACAGTTGCA GCCCGATGTG GTTTTGATGG ATATTCGGAT GCCGGTAATG
GATGGAGTTG CTGCCACTCG TGAGATAACG CGGCGTTGGC CTCAGATCGG TGTGATTATT
TTGACCACGT TTGACGACGA TGAATATGTG ATTGAGGGTT TGAAGGCCGG TGCGCGCGGG
TATATGCTTA AAGATGCCGA TAGTCATGAG ATTGTTGAGG CGGTGCGGAT TGTTACCCGC
GGTGAAGCAT TGATCCAGCC GAGTATCACG CGCAAGGTGT TGGCCGAGTT TACCCGATTG
GCCGGTGGGC ATACACCGGT AACGTCGCCG CTGACCGAAC CGCTAACCGA ACGCGAGATG
GATGTTTTGC ACGGTATTGC CGCCGGCAAG TCGAACCGTG AGATCGCCGA TCAGCTTTGT
ATCAGCGAGG GGACGGTCAA AAATCATGTG TCGAGTCTGT TGGCTAAACT CGATGTGCGT
GATCGAACCC AAGCGATTAT CCGCGCCCGT GAATTACGTC TCATCCCCTA A
 
Protein sequence
MIRILLVDDQ TLVRQGIQTL LDLEEDLTVV GAAANGQQAL ELAEQLQPDV VLMDIRMPVM 
DGVAATREIT RRWPQIGVII LTTFDDDEYV IEGLKAGARG YMLKDADSHE IVEAVRIVTR
GEALIQPSIT RKVLAEFTRL AGGHTPVTSP LTEPLTEREM DVLHGIAAGK SNREIADQLC
ISEGTVKNHV SSLLAKLDVR DRTQAIIRAR ELRLIP