Gene Cagg_2769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2769 
Symbol 
ID7269839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3401614 
End bp3403311 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content57% 
IMG OID643567590 
ProductTrkA-N domain protein 
Protein accessionYP_002464068 
Protein GI219849635 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAAG ATATACGCCT TACCCGGCTG AAACGGCGAC GTTTCGCTCT TTGGCGCTTA 
ATCATAGCTA ACATCATCGA TGACGTGCGC ATTGTGCGCG AAGCCTGGTT CCCGGTGAGC
GCATTAGTGC TGGTGCTCGG TAGTTGTACG CTCTACCTGC GCTGGTTTTA TTTACCTGAC
TACTGTGATT GTCAGCCGGA TACTGCGTTT GCTCTGTTTG AAACGCTCAA GTTGTTGTTG
TTTCAGACCG ATCTCTCACT GCCGGACGAG ATTATTGGAC GGACACTCTT CTTTCTGACC
CCGCTGCTTG GTCTCTTCTT TCTATTGCAA AGTGCGGTTG ATGTAGGTCG GTTGCTGGTC
GATAAGCGGA CCCGGCCAGA GCATTGGCAA GCAGCTCTGG CGGCTACGTA TCGCGGACAC
ATGATCGTCT GTGGTCTAGG ACGGGTTGGC TACCGTGCCG TGTTGCAACT GCTCGATTGT
CGACGCGAGG TGGTGGCGAT TGAGGCTAAT CCGGCCTGCG AGTTTATTCC GACACTGATC
AGCTTGGGTG TGCCGGTGAT CTACGGTGAT GCCCGCGATC CGGCAGTGTT GACCCGAGCT
GGTTTGCGGC GGGCACAAGG ACTGATTGCC ACAATTGACG ATGACCTCAA GAATGTGGAG
ATTGCTTTAT CCGCTCGTCG GATCCGCCCT GAATTGCCAA CAGTCCAACG GATCTTCAGC
CGTGCCCTCG ATGCCCGGAT CGAGCGCACG TTTGGCCGCA ATTCGGCCTT CAGCCCGGCA
GCACTGGCTG CACCAACCTT CGCTGCCGCG CTGATGAGCA CGACGGTGCG TTACGTGCTT
GATCTGCCGG CTGGGTTGCT TGGGGTAGCG TATCTTACCG TGAGCGATGA TAGTCCGCTG
ATCGGGCCGG TGGCCGCGAT GGAGCAACGG TTTGGAGTAC GGCGCTTGCC CGGTCCTAAT
GCGCAGTTCG ACATTGTGCC CAGTGAAGAA GTGGTGTTAG TGGGTTCGTT GCCGGCACTC
GAAGCTGTGC ATTTGGCGAA TCGCCCGCAA CCGGTGTGGC GTAATGGTGG CTTGATTGTG
TGTGGGTTGG GTAAAGTGGG AACGCAAGTG GTCCGATTGT TGATCCGGCG CGAGCCATGT
CCATCGCTCA CCGTCATTTG CACGGTGGAG ACGCCCCAAC GCTATATCGA AGTCTTGACC
GCGCAGGGTG TGCGTGTCTT GCGCGGTGAT GCGCGTGACC CAGAATTGTT GCGGGAAGCC
GGTATCGAGC ATGCATCGGC CCTGGCCGCT CTCTATAGCG ATGACCTGCT GAACCTACAG
ATTGGGTTGG CTGTGCGGAG TATGTACCCC GATGTACACC TTGTCTTGCG CGTCTTTAGC
GATGTGTTGG CCGACCGCTT AGCCGATCTG TTTGGGATTC ACACGGCCTT CAGTACTTCG
GCACTGGCTG CACCGAGCCT GGTTGCCGCA GCGCTGTTGC CGGATGTCGA AGCGGCTTTC
GATGTCGGCG ATCAACTGTT GGTGGTGCGT CGCCAGGTTA TTATCGATCG GCGGGTTGGT
CAGACGGTCG CCGAACTACG AGCCGCCGGT CAGTTGCCGC TGAGCGTCCG CCGCAATGGC
GATTTGCAAT GGCTACCACC CGATCAATTC GTGATCGAGT GTGGTGATGA GTTAGAGGTA
CTTACGTATT TGACGTAA
 
Protein sequence
MAQDIRLTRL KRRRFALWRL IIANIIDDVR IVREAWFPVS ALVLVLGSCT LYLRWFYLPD 
YCDCQPDTAF ALFETLKLLL FQTDLSLPDE IIGRTLFFLT PLLGLFFLLQ SAVDVGRLLV
DKRTRPEHWQ AALAATYRGH MIVCGLGRVG YRAVLQLLDC RREVVAIEAN PACEFIPTLI
SLGVPVIYGD ARDPAVLTRA GLRRAQGLIA TIDDDLKNVE IALSARRIRP ELPTVQRIFS
RALDARIERT FGRNSAFSPA ALAAPTFAAA LMSTTVRYVL DLPAGLLGVA YLTVSDDSPL
IGPVAAMEQR FGVRRLPGPN AQFDIVPSEE VVLVGSLPAL EAVHLANRPQ PVWRNGGLIV
CGLGKVGTQV VRLLIRREPC PSLTVICTVE TPQRYIEVLT AQGVRVLRGD ARDPELLREA
GIEHASALAA LYSDDLLNLQ IGLAVRSMYP DVHLVLRVFS DVLADRLADL FGIHTAFSTS
ALAAPSLVAA ALLPDVEAAF DVGDQLLVVR RQVIIDRRVG QTVAELRAAG QLPLSVRRNG
DLQWLPPDQF VIECGDELEV LTYLT