| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2633 |
|---|
| Symbol | |
|---|
| ID | 7267224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 3227048 |
|---|
| End bp | 3228313 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643567459 |
|---|
| Product | geranylgeranyl reductase |
|---|
| Protein accession | YP_002463938 |
|---|
| Protein GI | 219849505 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
|---|
| TIGRFAM ID | [TIGR02023] geranylgeranyl reductase
[TIGR02032] geranylgeranyl reductase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCCAC GCGTTCTGAT TGTCGGCGCA TCGGTGGGTG GGGCGACCGC AGCGATTACG
CTGCGGTCGT TCGGTATCGA GACGATACTG ATCGAGAAGG AACTGGTCAA GGCAAAGCCG
TGCGGTGGTG CAGTGCCGCC CGCCGCGTTT CGTGAGTTTG ATTTGCCGAC GAGCTTGATC
GATCGTAAGG TGCGCCAGTG TCTGATCGTG TCGCCTTCCG GCCAAGAGAC TCGTGTTCCG
GTAGCGGGTA CGGTTCCGAG TGAGGATGAT TATGTGGCAA TGGTGCGGCG CGAAGTGTTC
GATAGCTTCT TGCGTCGGCG GGCACAAGAG CGTGGTGCTG AGTTGATCCA TGCCCAACTG
ATCGGCCTGC GGGTTGATCG GCGTGGTGTT GAGGCGACAT ACCGCACCCC CTCCGGTCAC
GAAGGGTCGG TGTGGGCCGA TGTGGTGATC GGAGCTGATG GTGCCTATTC GCCGACGGCT
AAGTTTCTCG GCTTGCCGAA TCTACCCCGT GCAGTGGCCA TGCAAGAGCG GATTAAACTG
CCACCCGATA AGATGGCCCG CTGGGAAGAG ACGGCCGATC TGTACCTTGG GCACGAAGTT
AGTCCTGATT TGTACGCATG GGCCTTCCCC AAACGTGACC ACATTGCCGT CGGGATCGGC
GCCGGCCCCC GTCATGGCTC GGCGGCTAAG CAATTGCTGA ACAATCTCAA GCGGCGGCTC
GGTTCGGCCC TCGATGGTGG GCAAGTCATC TTGCGGGAAG CCCATGCCTT GCCGATGGAG
CCTCGTCCGC ACTTAGCCTT CGATCGGGTG ATGTTCATCG GTGATGCCGC CGGCTTAGTG
GTGCATACCT CCGGTGAGGG GATTTATTGG GCGATGAAGA GTGGGCAAAT GGCGGCACAA
ACACTGGCTG AGTATCTCGA TGCGCCGAGT GAGGCCAACC TACGCACCTA CGAGCGACGG
TGGTGGAAGC AGTACGGTAC GATGTACCGC TTCCTGCGTT TCTTGCAGGT CTGGGGGTAT
GGTAATGAGC GGCAGATGGA GGTGTTTACC GAGATGTGCC GCAACTACGA TGTACAACGT
CTGACGTTCG ATAGTTACAT GCACAAGCAG ATGGCACCGG CGCCGTGGTT GGCTCAGTTG
CGGATGACTG CCGAAATCAT CGCCAGCGAA GTTCGTAACT ATGTGCGGCC ACGGACACCG
CTCCGTGAGC AACTCGGTTT GACGATAGTC GAGAAGCAGA AGCAGCGGGT TGCGGCAGCA
GATTAG
|
|---|
| Protein sequence | MAPRVLIVGA SVGGATAAIT LRSFGIETIL IEKELVKAKP CGGAVPPAAF REFDLPTSLI
DRKVRQCLIV SPSGQETRVP VAGTVPSEDD YVAMVRREVF DSFLRRRAQE RGAELIHAQL
IGLRVDRRGV EATYRTPSGH EGSVWADVVI GADGAYSPTA KFLGLPNLPR AVAMQERIKL
PPDKMARWEE TADLYLGHEV SPDLYAWAFP KRDHIAVGIG AGPRHGSAAK QLLNNLKRRL
GSALDGGQVI LREAHALPME PRPHLAFDRV MFIGDAAGLV VHTSGEGIYW AMKSGQMAAQ
TLAEYLDAPS EANLRTYERR WWKQYGTMYR FLRFLQVWGY GNERQMEVFT EMCRNYDVQR
LTFDSYMHKQ MAPAPWLAQL RMTAEIIASE VRNYVRPRTP LREQLGLTIV EKQKQRVAAA
D
|
|---|
| |