Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_2610 |
Symbol | |
ID | 7267201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 3194923 |
End bp | 3196884 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643567436 |
Product | excinuclease ABC, C subunit |
Protein accession | YP_002463915 |
Protein GI | 219849482 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTCT CACATACCGC AGTTCGTGAT CACGCCGCAT TTCTTGAGCG GCTCCGCTTA GTTCCCGATC AGCCGGGTGT CTATCTCTGG AAAGACGCCA CCGGTCGCTT GCTCTATGTC GGCAAAAGCA AGCGTCTGCG CGACCGGATG CGTTCCTATT TTGGCTCGCC GCGTAGCCTT AGTGGGAAGA CACGCCGTTT GGTCAGCCAC ATCGCCGATT TTGAGATTAT CGTTACCCAA AGCGAGTTAG AGGCGCTGCT GTTAGAGATG AACTTGATTA AACAGCATCG CCCGCCGTAT AACATTTTGC TCAAAGACGA TAAGACGTAT CCCTACATCA AAGTCACCGT CAACGAAGAG TGGCCGCGCG TCTTCGCCAC CCGACAGGTG CTCAACGATG GAGCACGCTA TTTTGGCCCC TATGCCAGCG CCGGTTCGGT CTACCATGCT CTCGATATTC TCAATCGTCT GTTCGCCTTT CGCCCACCCT ACGAGTGCAA AGACGATAAG TTCAATCGTC ATCGTAAACA AGGTAAGCCC TGTCTCTACT ACCAAATGCG CCGTTGTCTA GGGCCGTGTG TGCCGGGGTT GGTGACGAAA GAGACCTACC GACAGGCTAT CGATTCGGTC TGCCGTTTTC TCGAGGGCAA GAGTGACCAA ATCGTGCGCG AGTTGCGCGC CCAGATGGAA GAAGCCGCCG AACGGCTTGA GTTTGAACGT GCCGCCTATC TGCGTGACCG TATTCAAGCC ATCGAGAAGA TATCCGAGCG CCAACAGGTC TTGCGTACCG TTGATACCGA CCAAGATGTG ATTGCGTTTG CCCGTGAAGA TGGTAGCGCG GTGGTGCAAG TACTGTTTAT TCGCGGTGGT AAGCTGATCA ACGCCGAACC GTTTACGTTG CAAGGTACTG AAGACGAGAG CGACGAGGCG TTGCTTACTT CGTTCCTCAC CCAGTTCTAT CAGCATGCAC CGAGCATCCC ACCGAGCTTG TTGCTGGCCG AACATGTTGA AGAACCACTG ATTATTGCGT CATGGTTGCA GCAGAAGAGT GGGCACCGCG TTGAAATTAC GGTGCCCCGC CGTGGCGAGA AGAAGCAGTT GGTTGAGATG GCTGCCGCCA ATGCCCGTCA GAAGTTGCGC GAAATCCGCG AGCAGTGGCT CCATTCCGAG CAACGGGCGG TCGCCGCATT GAGCGAATTG CGCGATCTGC TCGAGTTACC CGCGTTGCCC CGCCGGATCG AGTGCTACGA TGTCTCAAAT ACGCAGGGCC AGCAGTCGGT GGCGAGCATG GTGGTGTTCG AGCACGGCGA GCCGCGCCCC GCACACTACC GCCGTTTCAA GATCAAGACG GTCAGCGGTG CCAATGATGT CGCTTCGCTG CGCGAGGTGA TCAGTCGTCG CTTCCGTCGC GCCGCCGAGG CGCTTGGTGA TACTCAGCAG GCTGCCGCTG CGGTTGAGGT TGAAGGCGAG AACGACTCTC CCGCCGAACC GACCGATACG GCGCGGCAGG CGCTCGAACG CTGGGCCGAT TTGCCCGATC TGCTGCTGGT CGATGGGGGA GTAGCACAAG TGGCGGCGGT TGAGGCCGCT TTACACGAGT TGGGTTTTAC CCAGATACCG GTTGTTGGTG TGGCGAAAGG GCCGGATCGG AACCGTTTTG ATCTCGTCCG CATCGGTCAA GATCCGTTGG TGCTGGCCCG TGATAGCAAG GCGTTGGCCC TTGTCCAGCG GATCGATGAA GAGGCCCACC GCTTCGCCAT TACGTATCAT CGGAAATTGC GCAACAAAGC GACCCTTCGC TCGCCGTTGG ACGAGATTCC GGGGATCGGT CCCAAACGTA AACGTGCCTT GCTCAAGGCA TTCGGTTCCA TCGACGGTAT CCGCCGGGCC AGTATCGACG AACTTGCCGC CGTGCCCGGT ATGACCCGCA AAGCCGCCGA AGAGTTGAAG AGTTTGCTCT AG
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Protein sequence | MDLSHTAVRD HAAFLERLRL VPDQPGVYLW KDATGRLLYV GKSKRLRDRM RSYFGSPRSL SGKTRRLVSH IADFEIIVTQ SELEALLLEM NLIKQHRPPY NILLKDDKTY PYIKVTVNEE WPRVFATRQV LNDGARYFGP YASAGSVYHA LDILNRLFAF RPPYECKDDK FNRHRKQGKP CLYYQMRRCL GPCVPGLVTK ETYRQAIDSV CRFLEGKSDQ IVRELRAQME EAAERLEFER AAYLRDRIQA IEKISERQQV LRTVDTDQDV IAFAREDGSA VVQVLFIRGG KLINAEPFTL QGTEDESDEA LLTSFLTQFY QHAPSIPPSL LLAEHVEEPL IIASWLQQKS GHRVEITVPR RGEKKQLVEM AAANARQKLR EIREQWLHSE QRAVAALSEL RDLLELPALP RRIECYDVSN TQGQQSVASM VVFEHGEPRP AHYRRFKIKT VSGANDVASL REVISRRFRR AAEALGDTQQ AAAAVEVEGE NDSPAEPTDT ARQALERWAD LPDLLLVDGG VAQVAAVEAA LHELGFTQIP VVGVAKGPDR NRFDLVRIGQ DPLVLARDSK ALALVQRIDE EAHRFAITYH RKLRNKATLR SPLDEIPGIG PKRKRALLKA FGSIDGIRRA SIDELAAVPG MTRKAAEELK SLL
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