Gene Cagg_2569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2569 
Symbol 
ID7267158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3130888 
End bp3132414 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content58% 
IMG OID643567393 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_002463874 
Protein GI219849441 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACG AAAGCCCTAT CAGTGAACGA GAGCGTGAAA TCTTGCGCCT CGTCGCTACC 
GGTGCTACCA ATCAGCAGAT CGCAGTTGCT TTAAATATTA GTGTCAATAC GGTCAAGGTG
CATCTGCGGA ATATCTTTGC CAAGATCGGC GTTGAGTCGC GAACTGAGGC CACGGTGTAT
GCTATTCGGA CCGGGATTGT CACCGTTGGC GAGACAGAAA CCGTGATCAA CGATGAGACG
TTGGCTCCCG GAGAGAAGCC GGTCACCACC GAGCCGGTAT TTGCGCCAAC CCCTGTAGAA
CCTGAACCGC TCATCACTGC GCCATCGGCG GACGAGGCGT CGTCTGTGCG TGCCGAAGGA
GCAGAGCCGG TCGCCACCGA GCCGGTATTT GCGCCAACCC CTGTAGAACC TGAACCGCTC
ATCACTGCGC CATCGGCGAC TGAGGCTTCA CCTGTGCTTG CCGAACCGGT TCCATCCCCG
CTACCGGCAC CTGAATTGAC CCCATCTGCT CAACCACAAT CTCAGGCTGT GCGCAAATGG
CTTTGGCCGG TTGGATTGGT GGTTGTGCTC ATCATAGCTG TCATCTTTTT CGTGAATACG
CGCTTAGTGG CTAATCCACC ATTACCCGTC GTCCCGACCA CATCTGGTCT TATCGATTCC
ACCCAACGTT GGTTTATTCG CCAGCCGCTC GGCGAGCCGC GCGATCATTT TGCGCTTGCC
GGTTACGATC TTGAGCGACG ACTCTATGTT ATTGGTGGCA TGCGCAACAA CACCGTCGTT
GCCACCGTCG ATCGCTACGA TCCCGATACC AATCGCTGGG TAACCCTCAC CGATAAGCCA
ACCGCAGTGA GCTATGCCCG CGCCATCACC CTCCGTGGTC AAATCTTTGT GCCCGGTGGT
GAAGACGAGC GCGGGACGGT CAGTGACCGG CTTGAGATTT ACGATCCGCG TGAACAGCGT
TGGTACAGCG GTGCTCCCTT ACCCGCACCG CGGAGCCGCT ACGCCCTGGT TGCGTGGGAA
GGTCAATTGT ACCTCATCGG CGGGTGGGAT GGCACGACGA TTCGGGCTGA AGTCTTTATC
TACGATCCGG TGCTCGACCG TTGGGAGACG GGGCCGCCGT TACCACAGCC ACGGCAACAG
GCCGGTGTAA CCATTGCCAA TGGGCGACTA TACCTGATCG GCGGTGAAGG TGACAACGGC
CCGTTGCGCG AGAGCGCATG GCTCGAACCA CCGAACAGTC CGAGTCGGCG TTGGATGATC
ATTGCCCCTT TGCCGCAGCC GATCGCGCGC CCGGCAGTGA TTGGTCTTTC AAACACCTTG
TTAGTCTTCG ATAGCGAACG CCGCGAAAGT CTCTCGTATG ACATCGCTGC CGATGCATGG
AGTAAGGTGC CGTTGCCGGC AGACGCGCAA GTGTTTCCCG ATGCCGTCTT GCTCGGTTCA
AACGTCTATT TCGTCGGCGA TAGCCGCGCA CAAGGCACAT TGAGCGAGTA TCGCGCCTTA
TACGTCATCT TCATCCCCGG CCAGTAG
 
Protein sequence
MTNESPISER EREILRLVAT GATNQQIAVA LNISVNTVKV HLRNIFAKIG VESRTEATVY 
AIRTGIVTVG ETETVINDET LAPGEKPVTT EPVFAPTPVE PEPLITAPSA DEASSVRAEG
AEPVATEPVF APTPVEPEPL ITAPSATEAS PVLAEPVPSP LPAPELTPSA QPQSQAVRKW
LWPVGLVVVL IIAVIFFVNT RLVANPPLPV VPTTSGLIDS TQRWFIRQPL GEPRDHFALA
GYDLERRLYV IGGMRNNTVV ATVDRYDPDT NRWVTLTDKP TAVSYARAIT LRGQIFVPGG
EDERGTVSDR LEIYDPREQR WYSGAPLPAP RSRYALVAWE GQLYLIGGWD GTTIRAEVFI
YDPVLDRWET GPPLPQPRQQ AGVTIANGRL YLIGGEGDNG PLRESAWLEP PNSPSRRWMI
IAPLPQPIAR PAVIGLSNTL LVFDSERRES LSYDIAADAW SKVPLPADAQ VFPDAVLLGS
NVYFVGDSRA QGTLSEYRAL YVIFIPGQ