Gene Cagg_2556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2556 
Symbol 
ID7269402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3112762 
End bp3113112 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content50% 
IMG OID643567380 
Productanti-sigma-factor antagonist 
Protein accessionYP_002463861 
Protein GI219849428 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTTA CTCATCGCCG GCTCAATCGA GTTGATCTCA TTGAGGTTAT CGGGCGCGTT 
GACGCAGCTA CTGCTCCCCA ACTCAAGCAA CTCATCGAGT CCATTTTTAA CGACGGTCGT
TATCGCATTG TCCTGGATCT CAGCCGGCTT GAATATATTA GTAGCCCCGG TTTGCGCGTC
TTGATCGAAG CGCGCAAAAA GGCCCGGGAA TGGAAGATCA CCGATCTTGA AGGTGGTGAT
GTACGTATTG CCAACTTACC ACCTCGGATA AAAGAAGTCT TCGACCTAAC CGGCTTTAGC
TCGCTGTTCG AGATCTATGG CGATACCGTC GAAGCAGTTG GATCGTTTTA G
 
Protein sequence
MELTHRRLNR VDLIEVIGRV DAATAPQLKQ LIESIFNDGR YRIVLDLSRL EYISSPGLRV 
LIEARKKARE WKITDLEGGD VRIANLPPRI KEVFDLTGFS SLFEIYGDTV EAVGSF