Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_2551 |
Symbol | |
ID | 7269397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 3106225 |
End bp | 3107085 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643567375 |
Product | apurinic endonuclease Apn1 |
Protein accession | YP_002463856 |
Protein GI | 219849423 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACGAT TCGGCGCACA TATGTCTATC TCAGGTGGTG TCTCGAAGTC GTTTGCACGC GGCGAGTCGG TTGGGCTTGA TGCCATGCAG ATTTTCGCCA AGAATGAACG ACAATGGACG GCGAAACCGA TTTCTGCCGA AGAGATGGCT GCATTTCAGG CTGAACAGCA GCGTACCGGT ATCCATCCCG TGATCGTCCA CGACTCGTAT CTGATCAATC TCGCTGCGCC CGCTGATGAT CTGCGTGAGA AGTCGATTGT AGCCTTTGCT GATGAACTTG AACGCTGTGC CCAGCTTAAG ATACCCTATC TCGTAACCCA TCCCGGTGCT CATACTGGGA TTGGTGAAGA GGCCGGTTTG GTCCGGGTTG CCGATGCGAT CAGTCGCTTG CTCGCCGAGG GTGTGGGTGG TACAACGATG ATCTTGCTCG AAACGACGGC TGGTCAAGGG ACGGCTTTGG GGTATCGCTT TGAACATTTG GCTCGCTTGT TTGAGCTGAT CCCTTACCAC GACCGGCTCG GTGTCTGTGT CGATACGTGC CATATCTTTG CTGCCGGCTA TGATATTCGT GACCCCGATA CGTATGACGC AACGTTTGCT GAACTCGACC GCTTGGTTGG TCTGGAACGG GTAAAGTGTT TTCATCTGAA CGATTCGCAA AAGGATTTGG GGAGCCGGGT TGATCGTCAC GCGCATATTG GGCAGGGGTG CATCGGTACG GAGGCATTCC GGCTATTGGT TAATGACCCG CGCTTTGCCC ATCTGCCGAT GATCATCGAG ACGCCAAAGG GTGAAGATAT GGCGGAGGAT CGAATGAATC TGGCTCTGTT ACGATCCTTG GTACGGATTA CGGCAGCGTA G
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Protein sequence | MPRFGAHMSI SGGVSKSFAR GESVGLDAMQ IFAKNERQWT AKPISAEEMA AFQAEQQRTG IHPVIVHDSY LINLAAPADD LREKSIVAFA DELERCAQLK IPYLVTHPGA HTGIGEEAGL VRVADAISRL LAEGVGGTTM ILLETTAGQG TALGYRFEHL ARLFELIPYH DRLGVCVDTC HIFAAGYDIR DPDTYDATFA ELDRLVGLER VKCFHLNDSQ KDLGSRVDRH AHIGQGCIGT EAFRLLVNDP RFAHLPMIIE TPKGEDMAED RMNLALLRSL VRITAA
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