Gene Cagg_2439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2439 
Symbol 
ID7266162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2959503 
End bp2960345 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content59% 
IMG OID643567265 
ProductABC transporter related 
Protein accessionYP_002463748 
Protein GI219849315 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.110449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGC TCCCCTCTAG AAGGAGTTTT TCCGTGACGA CAGAGTATCT TGGCCGTCTG 
ATGGTTGAAC TGCGTCAGAT CCGCAAGACG TTCCCTACCG GTGATGGTGA ATTGATTGCA
CTTGACGATA TTAGCCTGAC GATAGAAGAG GGTGAGATGG TTGCCATCAT GGGGCCGTCG
GGTAGCGGGA AAAGCACCCT CATGACCTTA CTCGGCTTGC TCGACACTCC TACGTCTGGT
GAATACATTC TCGATGGGAT CGATGTCTCG CGGCTGAATC GGCAGGAACA GGCGCGTATT
CGCAATCGCA AGCTGGGGTT CGTCTTCCAG AACTTCAACC TCTTGCCACG CCTGACTGCG
CAAAAGAACG TTGAGTTACC GCTTGTCTAT GGGCGGGTCG GTGCGCGTGA GCGGGCCGAA
CGAGCACGGG CCGCGCTCGA GGCGGTCGGT CTTGGCCACA AACTCAACAG TCTGCCGAAT
ACGTTGTCGG GTGGGCAGAA GCAACGGGTC GCAATTGCCC GCGCGCTCGT TCACGATCCG
GCGATTATTC TGGCCGACGA ACCAACCGGT GCTCTCGACA CGCGCACCGG AGCCGAGATT
CTGGCGCTGT TCCGGGAATT GAACCGCGAT CAGGGACGCA CCATCGTGAT TGTCACCCAC
GATCCCGAAA TTGGTCGGCA TATGGATCGG GTGATCGGCT TGCGCGACGG GCGGCTGGTT
GACAACATCC TGAGCGAGTA CTACGGCGTT GAGGTGTTGG AAGAGGTCGA GCGTACCCGC
GGTCTTGAGC CGGTGCCGGT GCCGGTTGTG TGCCGTCCGC CGACCGATAC CACCACGCCA
TAA
 
Protein sequence
MNPLPSRRSF SVTTEYLGRL MVELRQIRKT FPTGDGELIA LDDISLTIEE GEMVAIMGPS 
GSGKSTLMTL LGLLDTPTSG EYILDGIDVS RLNRQEQARI RNRKLGFVFQ NFNLLPRLTA
QKNVELPLVY GRVGARERAE RARAALEAVG LGHKLNSLPN TLSGGQKQRV AIARALVHDP
AIILADEPTG ALDTRTGAEI LALFRELNRD QGRTIVIVTH DPEIGRHMDR VIGLRDGRLV
DNILSEYYGV EVLEEVERTR GLEPVPVPVV CRPPTDTTTP