Gene Cagg_2437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2437 
Symbol 
ID7266160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2957064 
End bp2957714 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content55% 
IMG OID643567263 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002463746 
Protein GI219849313 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000237388 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG TACCCTTGAT GCCCGACCCG CGAGTGATTG AAAGTCCGAC GGCGCTCCGC 
ATTCTCGATG TAGCGACACA ACTTTTTATG CAGCGCGGCT ATCGGGCCGT ATCGATTAGC
GACATCATTC ATACTGCCGG TGTGACAAAA CCGACCCTTT ACTACTACTT TAGCGACAAA
GAAGACCTGT TTGTGCAGAT GGGGCTAAAG GTGTTGTGGA CGATGAGTCG GCCACTGGCC
GAGCTAGCTG CGTCCGAGCG GGCGTTGGTT GAGCGATTGC GCGCAATGGC CGACTTGCTG
ATCTCCGGCT ATGAAGGTGA TATGCGCATT ATGCGCCACG AGATGACGGA GCACCTCAGC
GCGGCCGCAC GTAGTCGTTT GAGTGCTGCG TTCTATCAAC ACCTCTTCGC GCCGTTAACC
AAGATCATGC GTGAAGCGCT CACTGCCGGG GTAGTACGGG CCGATATGTC ACCGGCAATG
TTAGCAACGT TATTTCTCAG TCTGTGCGAG ACGTTTCACG AGCTGACTTC AACCAACGCG
ATGATGGGGT GGTCGGGTAG CGTCTCGGCG GAGTTATTGG TCGATATCTT TTTGTATGGG
GCCGGCACCC GGTCGGCAGA TAATCGTTCA GTAGGAATGG CAGAAGTATG A
 
Protein sequence
MTEVPLMPDP RVIESPTALR ILDVATQLFM QRGYRAVSIS DIIHTAGVTK PTLYYYFSDK 
EDLFVQMGLK VLWTMSRPLA ELAASERALV ERLRAMADLL ISGYEGDMRI MRHEMTEHLS
AAARSRLSAA FYQHLFAPLT KIMREALTAG VVRADMSPAM LATLFLSLCE TFHELTSTNA
MMGWSGSVSA ELLVDIFLYG AGTRSADNRS VGMAEV