| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2406 |
|---|
| Symbol | |
|---|
| ID | 7266129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 2925475 |
|---|
| End bp | 2926950 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643567232 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002463715 |
|---|
| Protein GI | 219849282 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.151226 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCGG GAACATCCAC TACGGCTACA ACTGAACTTG CCGCTCTCCG CGAAAACCGC
ACGATCTTGC ACTGGCTCAT CGTGGTCAGC GCGGCACTAT TGGTGCTCTT CTGGGTGGTT
GGTCTGATTG TGTGGTTGAA CCAGTCCACC ACCACGTTCC CCTTTGTAAT CGCGAGCGCC
ATAACCTTGA TCGGCGTAAC TATGTACGGC TTAGCAGGGT GGCTTCTCCA ATCCCAACAC
ATCGCATTGA GCCGACGCTG GCTCTTTTTG GCGATGATTA CCGGCGCAGC AATGGTTATC
ATCCTGTTCG GTGGTGCTGA TGGAGCGCGT ACCGTTGTCT TGCTGGTACC GATCATTAGC
GCCGGTCTCC TTGGTAGCGG ACGCGATACG CTCATTGTGA TTATCAGCAG TATCTTGGTG
TATGCGGCAT TGCTGCTCGG TGAACAACTC GGTGGTCTAC AACCATTATT AGACGATAAT
GTTGTGATTG ATACCGGTTT TCTGCTGACA ACCATTAGCG CAATCGGTAC ATTAGCCTGG
TTGAGTAGCC GTGATCTCAA TCGGGCACTG GCCGAATCGC ATTTGCGTGC TACAGAGCTA
CTCCGCAAGA CCGAACAGTT GATGGAGAAA AATATTCAAC AGGTTGAGCT AGGCAGCGAA
TTGGCCGCAG CGGCTGCCGA GTTGCAGGCC AATTCCCAAC AACAGGCCGG CGGAGCGAGC
GAGCAGGCTA GCGCCGTCTC TGAGGTCTCG ACCACGATTG AAGAATTGGG CAGTACGGCC
CGCCAAATTG CCCAAGCGGC AGAACACGTC TCGGAAGCTG CCCAACAGAC GCTTGAGCAG
TTGAGTAGTG GTCAAGATGC AGTTGATGAG AGTATTCAAG CCATGGAACG CATCCGGCAG
CGCGTCCAAG ATATTTCGAC CCGCGTGCTC GGCTTAGGGG AGCGATCCCA GCAGATCGGT
GAAATCATCG ACCTGATCGA CGATATTTCT GATGAAACCC ATTTGCTCGC GCTGAACGCC
GCCATCGAGG CTGCCGGCGC CGGTGAGTAT GGTCGCCGAT TTGCCGTGGT GGCGGCTGAG
GTAAAGAGTT TGGCCAATCG TACCCTTGCT GCGGCCAAAG AGGTGAAAGG GGTGATTGCC
GAGATCCGAC AGGCGACCGG CGCCGCCGTA TTGGCCGCCG AAGAGGGCAG CAAAGAGGTT
GAGCGCGGTG TTGAACTGGC CCATCGCGCC GGTCAGGTCA TGGACAATAT CGTCATGGTG
GCCGAACGCA CGGCTCAGGC TGCCGCCGAG ATCGGGCTGG CAACTGCTCA ACAGCAAAGC
GCCAGTGAGC AGGTCGTCGA GACGATGCGC GAAATCGCGG AAGTTGCCCG CCAATCCGCA
CAAAGCGCAC GCCATATGGC CGAATCGGCA GCAAAACTCA CCGCTATAGC AGCCCGCTTG
CACGGCTTGG CCCAAATCGA CACCGATCAC GCTTAG
|
|---|
| Protein sequence | MKAGTSTTAT TELAALRENR TILHWLIVVS AALLVLFWVV GLIVWLNQST TTFPFVIASA
ITLIGVTMYG LAGWLLQSQH IALSRRWLFL AMITGAAMVI ILFGGADGAR TVVLLVPIIS
AGLLGSGRDT LIVIISSILV YAALLLGEQL GGLQPLLDDN VVIDTGFLLT TISAIGTLAW
LSSRDLNRAL AESHLRATEL LRKTEQLMEK NIQQVELGSE LAAAAAELQA NSQQQAGGAS
EQASAVSEVS TTIEELGSTA RQIAQAAEHV SEAAQQTLEQ LSSGQDAVDE SIQAMERIRQ
RVQDISTRVL GLGERSQQIG EIIDLIDDIS DETHLLALNA AIEAAGAGEY GRRFAVVAAE
VKSLANRTLA AAKEVKGVIA EIRQATGAAV LAAEEGSKEV ERGVELAHRA GQVMDNIVMV
AERTAQAAAE IGLATAQQQS ASEQVVETMR EIAEVARQSA QSARHMAESA AKLTAIAARL
HGLAQIDTDH A
|
|---|
| |