Gene Cagg_2397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2397 
Symbol 
ID7268749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2915390 
End bp2916340 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content55% 
IMG OID643567223 
ProductL-lactate dehydrogenase 
Protein accessionYP_002463706 
Protein GI219849273 
COG category[C] Energy production and conversion 
COG ID[COG0039] Malate/lactate dehydrogenases 
TIGRFAM ID[TIGR01771] L-lactate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.851403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.362138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTAC GCAAACGCAC CGGTAAAGTT GGCGTGGTTG GCACCGGTAT GGTTGGTACT 
TCATTCGCGT ATGCCCTGAT GCAGCGCAGC CTCGCCAGCG AACTGGTGCT CATCGATATT
GATCGGGCAC GCGCCGAAGG TGAGGCAATG GATTTGAACC ATGGCCTGCC TTTTGTCCGC
CCAATGAGGA TCTACGCCGG CGACTACGCC GATCTTGCCG ACGCCGATCT GATCGTAATC
GCTGCCGGCG CAAACCAGCG CCCCGGCGAA ACTCGTCTCG ATCTGCTCGG TCGTAATGCA
GCTATCTTTC GAGACATGAT CCCTGCGATA CTGGCTGCCA ATCACGACGG GATTATTGTC
GTGGCAACCA ACCCGGTTGA CATCCTGACT ACTATCGCTG CGCAGATCGC CGGTTCTGAC
GCTAACCGTG TGATCGGCTC AGGCACCATT CTCGACACGG CACGCTTCCG CTATCTGCTC
GGTCAGCACT ACGGCGTCGA TCCGCGCTCG GTGCATGCCT ACATCGTCGG CGAGCACGGT
GATAGCGAAT TGGCTTTGTG GAGCCTGGCT AATATCGCCG GCGTTCGCTT GGTCGACTTT
GTCGGTGCTA ACGGGCAAGG CTACGATCAG GCTGCACTCG ATGCGATCCT CGAACAAACT
CGTAATGCCG CTTACGAAAT TATTAAGCGT AAACGGGCTA CATACTATGC TATTGGCTTG
GGTTTGTTGG CGATTGCCGA AGCCGTTCTC CGCGATCAAC ACACCGTAAT GACCGTTAGT
AGCTTGATGA CTGGCCAGTA CGGTGTAACC GATATTGCCA TTAGTTTGCC AACCATTGTT
GGTCGTGACG GTGCCGAAGA GGTGCTTAAT CTACCGTTGT CAGACCACGA AGTCGCTCTC
TTCCAACGCT CGGCCAATCT TTTGAAAGAG TACCTCGCTC AGGTAAGTTA A
 
Protein sequence
MSLRKRTGKV GVVGTGMVGT SFAYALMQRS LASELVLIDI DRARAEGEAM DLNHGLPFVR 
PMRIYAGDYA DLADADLIVI AAGANQRPGE TRLDLLGRNA AIFRDMIPAI LAANHDGIIV
VATNPVDILT TIAAQIAGSD ANRVIGSGTI LDTARFRYLL GQHYGVDPRS VHAYIVGEHG
DSELALWSLA NIAGVRLVDF VGANGQGYDQ AALDAILEQT RNAAYEIIKR KRATYYAIGL
GLLAIAEAVL RDQHTVMTVS SLMTGQYGVT DIAISLPTIV GRDGAEEVLN LPLSDHEVAL
FQRSANLLKE YLAQVS