Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_2357 |
Symbol | |
ID | 7268707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 2866270 |
End bp | 2867235 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643567186 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_002463671 |
Protein GI | 219849238 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0141564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00538741 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACACGGG TGTTGATTAA CGGGGCGACC GGGGCGTTGA GTGTGCGGTC GGCCCAGTTG CTAAGCCAAA CCCACGAGGT GATCGTACTC GGTACACAAC CTCCGCCTGG GCCGATTGGC CGTGCCGATT GGCTGGTTGC GCAACTTGAT CGCCAGCAGT GGCTTGAATT GTTGCGCGCC GAACAGATCG AAACGGTGAT CCATTTCGAT CTGCTCGGTT TTGATGGACC GTTGCTCGAT CACGAGACGA CCGTCCAGCA CAATGTCATC GGAACGATGC AGTTGCTCGG TGCCTGCCGA GCGGCCGGCG TTCGCCATAT TGTTGTGCGT AGTCATGGCT GGATCTACGG GGCGAGTCCG CTGAATCCGT TGTTCATTAC CGAAGATCGT CCGATCACGA TCCAGCATCG TCACGGCGTG TTGCGCACGT TGGGCGAAAT AGAGCAAGTT GTTGCCGATT TTGCTGCGCA TCATCCCCAC ATAACGGTGA CATTGCTGCG TTATGTGCCA TTACTCCTGC ACGACACGCC CCTCATGCGG TATCTCAATG CACCTTCACC GCCAATGCTG TTTGGATTTG ACCCAATGAT CCAGTTGCTG CACGTTGATG ATGCTGCTCG TGCTGTGCTT GCGGTAGTTG ATCAACCGAC CGGCGGTGCG TTTAATATTG CTCCTGAACA GCCGATGCCG CTCAGTCAAG TTATTCGTCG GCTCGGTAAG CAGCCGTCAT CGGTGGTCGG GCCGTTGTTT GACAACCAAC CGCCGGCCGG ATGGCCGTTC GATACCGATT TCTTGCGTTA CCGCTGTACA ATCGACCCCC AACGCGCCTG TCGCTTGTTA GGCTGGTCGG CGCAGTACGA GATGGCTACT GCCCTCGATT CGCTTCTGCC GCGCTCACCA GAAGCGGAGC GGGTAGCCGC TGCGCAGGCA CTGAAGGAGT TTTTACAGCG TAGGAGGGGT GCGTAA
|
Protein sequence | MTRVLINGAT GALSVRSAQL LSQTHEVIVL GTQPPPGPIG RADWLVAQLD RQQWLELLRA EQIETVIHFD LLGFDGPLLD HETTVQHNVI GTMQLLGACR AAGVRHIVVR SHGWIYGASP LNPLFITEDR PITIQHRHGV LRTLGEIEQV VADFAAHHPH ITVTLLRYVP LLLHDTPLMR YLNAPSPPML FGFDPMIQLL HVDDAARAVL AVVDQPTGGA FNIAPEQPMP LSQVIRRLGK QPSSVVGPLF DNQPPAGWPF DTDFLRYRCT IDPQRACRLL GWSAQYEMAT ALDSLLPRSP EAERVAAAQA LKEFLQRRRG A
|
| |