Gene Cagg_2357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2357 
Symbol 
ID7268707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2866270 
End bp2867235 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content57% 
IMG OID643567186 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002463671 
Protein GI219849238 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0141564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00538741 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACACGGG TGTTGATTAA CGGGGCGACC GGGGCGTTGA GTGTGCGGTC GGCCCAGTTG 
CTAAGCCAAA CCCACGAGGT GATCGTACTC GGTACACAAC CTCCGCCTGG GCCGATTGGC
CGTGCCGATT GGCTGGTTGC GCAACTTGAT CGCCAGCAGT GGCTTGAATT GTTGCGCGCC
GAACAGATCG AAACGGTGAT CCATTTCGAT CTGCTCGGTT TTGATGGACC GTTGCTCGAT
CACGAGACGA CCGTCCAGCA CAATGTCATC GGAACGATGC AGTTGCTCGG TGCCTGCCGA
GCGGCCGGCG TTCGCCATAT TGTTGTGCGT AGTCATGGCT GGATCTACGG GGCGAGTCCG
CTGAATCCGT TGTTCATTAC CGAAGATCGT CCGATCACGA TCCAGCATCG TCACGGCGTG
TTGCGCACGT TGGGCGAAAT AGAGCAAGTT GTTGCCGATT TTGCTGCGCA TCATCCCCAC
ATAACGGTGA CATTGCTGCG TTATGTGCCA TTACTCCTGC ACGACACGCC CCTCATGCGG
TATCTCAATG CACCTTCACC GCCAATGCTG TTTGGATTTG ACCCAATGAT CCAGTTGCTG
CACGTTGATG ATGCTGCTCG TGCTGTGCTT GCGGTAGTTG ATCAACCGAC CGGCGGTGCG
TTTAATATTG CTCCTGAACA GCCGATGCCG CTCAGTCAAG TTATTCGTCG GCTCGGTAAG
CAGCCGTCAT CGGTGGTCGG GCCGTTGTTT GACAACCAAC CGCCGGCCGG ATGGCCGTTC
GATACCGATT TCTTGCGTTA CCGCTGTACA ATCGACCCCC AACGCGCCTG TCGCTTGTTA
GGCTGGTCGG CGCAGTACGA GATGGCTACT GCCCTCGATT CGCTTCTGCC GCGCTCACCA
GAAGCGGAGC GGGTAGCCGC TGCGCAGGCA CTGAAGGAGT TTTTACAGCG TAGGAGGGGT
GCGTAA
 
Protein sequence
MTRVLINGAT GALSVRSAQL LSQTHEVIVL GTQPPPGPIG RADWLVAQLD RQQWLELLRA 
EQIETVIHFD LLGFDGPLLD HETTVQHNVI GTMQLLGACR AAGVRHIVVR SHGWIYGASP
LNPLFITEDR PITIQHRHGV LRTLGEIEQV VADFAAHHPH ITVTLLRYVP LLLHDTPLMR
YLNAPSPPML FGFDPMIQLL HVDDAARAVL AVVDQPTGGA FNIAPEQPMP LSQVIRRLGK
QPSSVVGPLF DNQPPAGWPF DTDFLRYRCT IDPQRACRLL GWSAQYEMAT ALDSLLPRSP
EAERVAAAQA LKEFLQRRRG A