Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_2300 |
Symbol | trpC |
ID | 7266713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 2802611 |
End bp | 2803432 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643567130 |
Product | indole-3-glycerol-phosphate synthase |
Protein accession | YP_002463615 |
Protein GI | 219849182 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0956436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGAAC CATCTATCCT TGAACAGATT TTGGCCCATA AACGGCTTGA GGTCCGCCGA CAGCAGGCGA AAATCCCTTT AGCAGTACTG CGTGAGAAAG TTCATCGGGC GCCACCGGTG CGCGATTTTG CGGCAGCCCT CCGTCGTACA CCGAGTACCG CGCTGATTGC CGAGGTAAAG AAAGCATCGC CGAGTCGGGG GGTATTGCTC ACCGATTTCG ACCATCTGGC GCTCGCCCGC ACTTACGTGG CAAATGGCGC CGCCGCGATT TCGGTCCTTA CCGACCAGCG CTTCTTTCAG GGCAGTTTGA TGTATCTAAC CGGCATCCGC AAGCTCCCTG AAGTGCAACA GGTCGGTACA CCGCTGCTGC GTAAGGATTT TATTATCGAT CCGTACCAAG TCTACGAAGC ACGCGCTTAC GGCGCCGACG CCCTACTGCT GATCGTCGCT GCGCTTGACG ATGAGCTTCT CCGCGATTTG TTTGCTCTCA CATACGAGCT TGGTATGCAT GCGCTGATCG AGGTACATAC TATCGCCGAA CTTGAACGCG CGTTATCGCT CCATCCTCCG ATCATCGGCG TGAATAACCG CGATCTGCAT CGTTTTGTCA CCGAACGAAC AACGACGAAG ATGATTGCCG ACGCTTTACC TCCTCCACCG CACCGTCCAT TACTGGTGAG CGAAAGTGGA ATCTTTACGC CAGAACACGT TGCCGAAGTG CGTAGCTATG GCGCCGATGC CATCCTGGTC GGTGAAGCAT TGGTGACGGC AGGTGATATC GGTGCACAGG TGCGAGCGTT GGCAACCGCA TCCACAAGGT GA
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Protein sequence | MREPSILEQI LAHKRLEVRR QQAKIPLAVL REKVHRAPPV RDFAAALRRT PSTALIAEVK KASPSRGVLL TDFDHLALAR TYVANGAAAI SVLTDQRFFQ GSLMYLTGIR KLPEVQQVGT PLLRKDFIID PYQVYEARAY GADALLLIVA ALDDELLRDL FALTYELGMH ALIEVHTIAE LERALSLHPP IIGVNNRDLH RFVTERTTTK MIADALPPPP HRPLLVSESG IFTPEHVAEV RSYGADAILV GEALVTAGDI GAQVRALATA STR
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