| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2179 |
|---|
| Symbol | |
|---|
| ID | 7266752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 2672353 |
|---|
| End bp | 2673414 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643567010 |
|---|
| Product | LPXTG-motif cell wall anchor domain protein |
|---|
| Protein accession | YP_002463498 |
|---|
| Protein GI | 219849065 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.978401 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGCA TGTATGCCCT GCTCGTCACA CTCATTATGA GTCTCGTCGT CTGGCAACCG
GTAATTGCCC AGACCAACGC CATTGAAGCG GCATTGACAT GGGTTGCCGG TCAACAACAA
GCTGATGGCA GTTTTGCCGG TTTTGGTCCC GGTGATACCG CCGATGCAAT CGTTGCCTTT
GTCGCCGGCG GGCAACAACC ACCGGCGAAC GCCGTTACCT ATCTCGCCGG ACAAGCGGCC
ACGTATGGAA CCTCTTCGGC CGGCGCGACT GCGAAGGTCA TTTTGGCTGC CGTCGCCGCC
CAGCGCGATC CACTCAACTT CGGTGGAGTG AATTTGGCCC GTCAACTCGG CACTTTCTAC
GATCCGGCAA CCGGCCAGTA CGGGAGTGAT GTCTACGGAC ACGCCCTGGC ATTGCTCGCC
ATCAAAGCGA TGGGGGTTGA ACCACCGGCA GCCGCCATCA ATCGGTTGAT CGCGTTGCAA
TTGCGTGACG GTGGTTGGAG CTTTGATGGC GCAGCAGCAA CCGGCAGCGA CACCAATACC
ACGAGCCTGG CGGTGATGGC ATTGAGTGGT TATGCCCGCG CCGCCGATGC ACTGACAGCA
GCACGGACCT ATCTGCGTGG TCAGCAAAAC CCCGATGGTG GGTTCCCCTA CTCACAAACG
TCGGCGTTCG GTAACGCCAG TGACGCCAAT TCGACGGCAG CGGTCGTTCA GGCCATTCTT
GCACTGGGCG AAAACCTGGA CGACGCAGCG TGGAAGCAAG GTAATGCCAC TCCGTTGAGC
GCTTTAGCCG CATTTCAGAA TAGTAGTGGC GCGTTCCGTT ATCAAGATGC AATGCCCGAC
GACAACGCAC TTGCTACCTA TCAAGCCATT CCCGCGCTGG CCCGTCGGAC TTTGCCGGTC
GCAACCACGA CGATCCCGAC CGCGCAGAGC TTGATCGCAC CTGCCGGCAC GTTACCACGC
ACCGGTGGCG AACCGATCCT GCCTCTACCG TTGTTGGTTG TCGGCGGGTT GGGATTGCTG
GTTGCCGGGG TAGCGCTGCG ACGCAAGTCG GCCCAAGTGT GA
|
|---|
| Protein sequence | MRRMYALLVT LIMSLVVWQP VIAQTNAIEA ALTWVAGQQQ ADGSFAGFGP GDTADAIVAF
VAGGQQPPAN AVTYLAGQAA TYGTSSAGAT AKVILAAVAA QRDPLNFGGV NLARQLGTFY
DPATGQYGSD VYGHALALLA IKAMGVEPPA AAINRLIALQ LRDGGWSFDG AAATGSDTNT
TSLAVMALSG YARAADALTA ARTYLRGQQN PDGGFPYSQT SAFGNASDAN STAAVVQAIL
ALGENLDDAA WKQGNATPLS ALAAFQNSSG AFRYQDAMPD DNALATYQAI PALARRTLPV
ATTTIPTAQS LIAPAGTLPR TGGEPILPLP LLVVGGLGLL VAGVALRRKS AQV
|
|---|
| |