| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2092 |
|---|
| Symbol | |
|---|
| ID | 7267599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 2561737 |
|---|
| End bp | 2563515 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643566926 |
|---|
| Product | malto-oligosyltrehalose trehalohydrolase |
|---|
| Protein accession | YP_002463415 |
|---|
| Protein GI | 219848982 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
|---|
| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAATC TGCCACAACC CGGTGCGGTT TACCGCAGTG ATGGTACAAC TGCCTTTACC
TTATGGGCGC CAACTGCCGC GACCGTTGAA CTGATCGTTC TTGATCCGAA ACCCCGGACA
GTGACGATGA AACCGATCGG TTATGACTGC TGGCACGTAG TCACGGAAGC GCCACCCGGC
ACACGCTACC GCTACCGACT CGATGGTCAG CGGGAGCGAC CCGATCCGGC ATCGCGCTGC
CAACCCGAAG GCGTGCATGG CCCATCGGCA GTTGTAGATC ATCACTTCGA CTGGAGTGAT
GCGGCGTGGC GCGGCGTACC ACTCACCGAT CTTGTCATCT ACGAGCTACA CGTCGGCACC
TTTACCCCAG AAGGAACCTT CACGGCCATC ATCCCCCATT TACCGATACT CCGTGACCTC
GGCGTGACGG CTATCGAACT CATGCCGGTA GCCCACTTCC CCGGCCAACG TAATTGGGGC
TACGATGGCG TCTACCTCTA CGCTCCACAC ACGGTCTATG GTGGCGTCAA GGGTCTGAAG
CAATTGGTCG ATGCTGCCCA TGCCCACGGC ATCGCCGTCA TCCTCGATGT GGTCTACAAT
CACTTTGGCC CCGAAGGTAA CTATTTGTGG GACATCGCAC CGCCGGCGTT TACCGATCGC
TACCGCACAC CGTGGGGATC GGCGATCAAT TACGATGGTC CCGACAGTGA TCTGGTCCGC
TGGTTGATCA TCGAGAACGC CCTGGAATGG CTGCGTGAGT ATCATATTGA CGGCCTGCGG
CTCGATGCAA CGCATGCGAT CTTCGATGTA TCGCCGTACC ACGTGCTTGA AGAGTTAGCC
GACCGGGTGC GCGAACAAGC GATCCGCCTC GGTCGTCCGG CGTATCTCTT CGCCGAGCAT
CCGCTCAACG ATCCGCGCTT TGCCCGCCCT AAGGTCCTCG GCGGGTACGG TTTAAGCGGC
ATTTGGTCGG ACGATTTTCA TCATGCCCTG CATAGTTTTC TCACCGGTGA ACAAAACGGG
TACTACGCAG GCTTCGGTAG TTTGGCACAG ATAGCGACGG CAATCGAGCG TAGCTTTGTC
TTTGCCGGTG AATATTCACC GCACGCCCGC CGTCGCTTTG GTCGCGATCC TTCCGAACTT
GCACCCGAAC AATTTGTGGT CTTTTTGCAA AACCACGACC AAGTCGGTAA TCGTGCTATT
GGTGACCGAC TAGGGGCAAC GTTGAGTGAA GCGCAATTAC GAGTTGCTGC CGCGACGGTA
CTGCTCAGCC CGTATACACC GTTGATCTTC ATGGGTGAGG AGTATAACGA GCCGGCGCCC
TTTCAATATT TTACCGACCA CAGTGACCCG GCACTGATTA CCGGAGTACG CGAGGGCCGT
AAACGTGAGT TTGCCTACTT CTTACGTCCC GGCCAGGAAG TGCCTGACCC ACAAGATCCG
ACCACGTTTA CCCGATCGAA ACTCAATCAC GCTTTACGCA CGGTCGGCAG GCACGCGGCC
CATCAGGCCT TTTACCGCGA ACTGTTGCGG TTGCGGCGTG AGCTACCGGG GTTACGTCAA
CGGCCCCGTA CCCGTGTGCA AGGTCAGACA ATCGTGGTAG AATGGCCGCG CATCCGGCTA
CTGCTCAATT TCGGCCCGGA TCCAATACGG ATCGAACTGC CGGTAGCATC CTGGCAGATC
CGGCTCGACA GTGGCGATCC GCCCGCAACA ATCCTAGACG GCATGAGAGT CACGTGCAGC
GGGTACAGTG CTGTGCTGCT AACCACACAC AATGAGTAA
|
|---|
| Protein sequence | MFNLPQPGAV YRSDGTTAFT LWAPTAATVE LIVLDPKPRT VTMKPIGYDC WHVVTEAPPG
TRYRYRLDGQ RERPDPASRC QPEGVHGPSA VVDHHFDWSD AAWRGVPLTD LVIYELHVGT
FTPEGTFTAI IPHLPILRDL GVTAIELMPV AHFPGQRNWG YDGVYLYAPH TVYGGVKGLK
QLVDAAHAHG IAVILDVVYN HFGPEGNYLW DIAPPAFTDR YRTPWGSAIN YDGPDSDLVR
WLIIENALEW LREYHIDGLR LDATHAIFDV SPYHVLEELA DRVREQAIRL GRPAYLFAEH
PLNDPRFARP KVLGGYGLSG IWSDDFHHAL HSFLTGEQNG YYAGFGSLAQ IATAIERSFV
FAGEYSPHAR RRFGRDPSEL APEQFVVFLQ NHDQVGNRAI GDRLGATLSE AQLRVAAATV
LLSPYTPLIF MGEEYNEPAP FQYFTDHSDP ALITGVREGR KREFAYFLRP GQEVPDPQDP
TTFTRSKLNH ALRTVGRHAA HQAFYRELLR LRRELPGLRQ RPRTRVQGQT IVVEWPRIRL
LLNFGPDPIR IELPVASWQI RLDSGDPPAT ILDGMRVTCS GYSAVLLTTH NE
|
|---|
| |