Gene Cagg_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1993 
Symbol 
ID7268909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2435779 
End bp2437158 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content61% 
IMG OID643566824 
ProductPhosphomannomutase 
Protein accessionYP_002463317 
Protein GI219848884 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00229621 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGCGTAG CGCTCAATCC AACGATCTTT CGCGCGTATG ACATTCGCGG GATCGTCGAG 
GTGGATCTCG ACGAAGGGAT TTATGAGTTG CTTGGGCGGG CGGCGGGCAC CCTGTTTCGC
AACGAAGGTC GCCGGCGGAT GGTGGTAGCG CGTGATGCGC GGCTGAGTTC GCCTCGCTTT
CAGGCGGCGT TGATGGAGGG GTTGCGCGCC ACCGGGATGG ACGTGCTCGA TATTGGTATG
GTGGCGACGC CGGTGATGTA TTTTGCGGTC GAGGCATTGG GTGCCGATGC CGGGGCGATT
GTGTCGGCCA GCCATAACCC GCCGGAATTC AACGGTCTGA AGCTGCGCCG CGCCGAGCCG
TGCTTCGGTT CCGAGCCGCT ACCTTCGGAG GCGATTCAAG CGGTGGGAAC GATTGCCGCC
AGCGGTCATT TTGCGCAGGG CGCTGGCCAT TACGAGCAGG TTGACATTGG CCCGGCCTAT
ATCGAGTCGG CCCGGCGCTG GATCGATTTC GGCCACCGCC GTCCGCGTGT GGTGCTCGAC
GGCGGCAATG GCGTGGCCGG CCCGTTGGCC GTTGCAATGT ACGAAGCGCT TGGAATCGAG
GTTATTCCGC TGTTTATTGA GCCGGACGGC ACCTTCCCCA ACCACCATCC CGATCCGTTG
AAGGTTGAAA ACTTGCGCGA TTTGCAAGCG GCGGTGCGCG AGTATCGCGC TGATCTCGGC
ATTGGCCTTG ATGGCGATGG TGACCGGCTG GGGGTGGTGG ATGAGACCGG TGAAGTGGTA
TTCGCCGATC GCTATCTGAT TGCACTCGCC AAGGCGATGC TGGTCAAACG GAAGGGGCCG
GTGGTCTTTG ACGTGAAGTG TAGCGCCGTC TTGCCACAGG CTATCCGCGA GTTGGGCGGC
GAGCCGGTGA TGTGGAAGAC CGGCTACACC AGCTTGTCGG CGAAGATGCG TGAAGTGGAC
GCGGTGTTGG GCGGTGAGTT GAGTGGTCAT ACCATCTTTC CCTTCCCCGG ACGGTATTTT
GATGACGGTG CGTTTGCGGG GGCGATGCTA CTGTATGCCC TCGGCGAGTT GGGGCAGACG
CTGCGCGAGG TGTTGGCCCC GTATCCGGTG TTACCGTCGA TTGATGAAGG TCGGATACCC
TTCCCCGAAG AGCGCAAGTT TGCTGTGATC GACTTCCTGC GTGAGCGGTT TGCCGGCAAG
TACCCGCTGA TAGATATTGA CGGCGTGCGA GTTGATTTTG GCGATGGCTG GGGGTTGGTG
CGGGCCTCGA ATACCGAACC GGCGATTACT ACTCGTTTTG AGGCCCAGAC GTGGGAGCGT
GTGAGCGCAA TTCGTGATGA GATGTTGAGC GTCGTTGAGG AGTTTCGCAC ACAGGCATGA
 
Protein sequence
MGVALNPTIF RAYDIRGIVE VDLDEGIYEL LGRAAGTLFR NEGRRRMVVA RDARLSSPRF 
QAALMEGLRA TGMDVLDIGM VATPVMYFAV EALGADAGAI VSASHNPPEF NGLKLRRAEP
CFGSEPLPSE AIQAVGTIAA SGHFAQGAGH YEQVDIGPAY IESARRWIDF GHRRPRVVLD
GGNGVAGPLA VAMYEALGIE VIPLFIEPDG TFPNHHPDPL KVENLRDLQA AVREYRADLG
IGLDGDGDRL GVVDETGEVV FADRYLIALA KAMLVKRKGP VVFDVKCSAV LPQAIRELGG
EPVMWKTGYT SLSAKMREVD AVLGGELSGH TIFPFPGRYF DDGAFAGAML LYALGELGQT
LREVLAPYPV LPSIDEGRIP FPEERKFAVI DFLRERFAGK YPLIDIDGVR VDFGDGWGLV
RASNTEPAIT TRFEAQTWER VSAIRDEMLS VVEEFRTQA