Gene Cagg_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1946 
Symbol 
ID7268862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2378109 
End bp2378885 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content56% 
IMG OID643566784 
Productmethionine aminopeptidase, type I 
Protein accessionYP_002463277 
Protein GI219848844 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000225398 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGATTA TTCTGAAATC TCCTGCACAG ATTGAATTGT TACGTACCGC CGGTCAACTG 
GTGCGGCAGA CGTTCAACGT GCTGCGCGAA CATATCCGTC CGGGCGTAAC CACGGCTGAA
CTGGACGCGA TTGCTGAGGA GTTTATCCGT TCACACGGCG CCGAACCAGT TTATAAAGGG
TATGTACCGG CGGGTCGCCG TAACTACGTG CCTCCGTTCC CCGGTACCAT CTGCGCTTCA
ATTAACGATG TGATCTGCCA CGGTATTCCG AGCAAGCGCG ACCGGCTACG GCAAGGTGAT
ATTGTTGGAA TCGATATCGG CTTGCGCCTC AACGGTTGGA TCGGCGACGC TTGCGAAACC
TTCGCCGTGG GTGAGGTTGA TGAAGAGACA CAACGCCTCC TCGATGTCAC CCGTCGTTGC
CTTGAGCTGG GAATTGAGCA GGCGCGTGTC GGTAATCCAT TGCGGGCGAT CGGCGCAGCT
ATTCAACGCT ATGCTGAAGC CAACGGTTTT GCTGTGGTGC GCGAATATAC CGGTCACGGC
TTGGGTCGTG ATCTGCACGA GGAGCCAACC ATTTTGCACT ACGACGACCC TCGCCAGACC
CGTAAAATCG TGGCCGGGAT GGTCTTTACT ATTGAGCCGA TGATTAATGT CGGTACGGCG
GCAACCAAAG TCGACCGTGA CGGTTGGACG GTACGGACGG CTGATGGCAA GCGGTCGGCC
CAGTTTGAGC ATACGCTCGC CATTACCGAT GAAGGACCGA TCATTTTAAC CGCCTAA
 
Protein sequence
MPIILKSPAQ IELLRTAGQL VRQTFNVLRE HIRPGVTTAE LDAIAEEFIR SHGAEPVYKG 
YVPAGRRNYV PPFPGTICAS INDVICHGIP SKRDRLRQGD IVGIDIGLRL NGWIGDACET
FAVGEVDEET QRLLDVTRRC LELGIEQARV GNPLRAIGAA IQRYAEANGF AVVREYTGHG
LGRDLHEEPT ILHYDDPRQT RKIVAGMVFT IEPMINVGTA ATKVDRDGWT VRTADGKRSA
QFEHTLAITD EGPIILTA